RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 TIFAQ96CG3 184 aa12.11□□□□□ -0.47
CDK11A-222ENST00000498810 C16orf70Q9BSU1 422 aa12.11□□□□□ -0.47
CDK11A-222ENST00000498810 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
CDK11A-222ENST00000498810 BCAS3Q9H6U6 928 aa12.11□□□□□ -0.47
CDK11A-222ENST00000498810 SH3GLB2Q9NR46 395 aa12.11□□□□□ -0.47
CDK11A-222ENST00000498810 ERAP1Q9NZ08 941 aa12.11□□□□□ -0.47
CDK11A-222ENST00000498810 MICAL3Q7RTP6 2002 aa12.11□□□□□ -0.47
CDK11A-222ENST00000498810 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 ST8SIA5O15466 376 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 ATP9AO75110 1047 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 CKBP12277 381 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
CDK11A-222ENST00000498810 NEK4P51957 841 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 AK2P54819 239 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 EVCP57679 992 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 IGBP1P78318 339 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 ZNF200P98182 395 aaPredicted RBP12.1□□□□□ -0.47
CDK11A-222ENST00000498810 PPFIA1Q13136 1202 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 PKN1Q16512 942 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 FAM160B1Q5W0V3 765 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 RSPH3Q86UC2 560 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 ZNF577Q9BSK1 485 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 SMARCAD1Q9H4L7 1026 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 SETD4Q9NVD3 440 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 NFASCO94856 1347 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 EMSYQ7Z589 1322 aa12.1□□□□□ -0.47
CDK11A-222ENST00000498810 LAMA3Q16787 3333 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 TMEM265A0A087WTH1 108 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 ARP10275 920 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 ATP2A2P16615 1042 aaKnown RBP12.09□□□□□ -0.47
CDK11A-222ENST00000498810 ACTR2P61160 394 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 SCRN1Q12765 414 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 NTRK3Q16288 839 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 PRR16Q569H4 304 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 FAM109BQ6ICB4 259 aaPredicted RBP12.09□□□□□ -0.47
CDK11A-222ENST00000498810 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 NIPA1Q7RTP0 329 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 CKAP2LQ8IYA6 745 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 WASF1Q92558 559 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
CDK11A-222ENST00000498810 UIMC1Q96RL1 719 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 SLC9A7Q96T83 725 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 UPF2Q9HAU5 1272 aaKnown RBP12.09□□□□□ -0.47
CDK11A-222ENST00000498810 AGO4Q9HCK5 861 aaKnown RBP12.09□□□□□ -0.47
CDK11A-222ENST00000498810 BRMS1Q9HCU9 246 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 CXXC1Q9P0U4 656 aaPredicted RBP12.09□□□□□ -0.47
CDK11A-222ENST00000498810 TUBE1Q9UJT0 475 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 PCDHA4Q9UN74 947 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 STK36Q9NRP7 1315 aa12.09□□□□□ -0.47
CDK11A-222ENST00000498810 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 RSPH10B2B2RC85 870 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 KIF28PB7ZC32 967 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 M0QZ92 97 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 IPO5O00410 1097 aaKnown RBP12.08□□□□□ -0.48
CDK11A-222ENST00000498810 TREHO43280 583 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 BAIAP3O94812 1187 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 RSPH10BP0C881 870 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 FOSL2P15408 326 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 TRIM29Q14134 588 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 GRIK4Q16099 956 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 ZNF618Q5T7W0 954 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 MIS18BP1Q6P0N0 1132 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 CNKSR3Q6P9H4 555 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 SERINC5Q86VE9 423 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 BLIDQ8IZY5 108 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 LMBR1Q8WVP7 490 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
CDK11A-222ENST00000498810 PBX4Q9BYU1 374 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 RNPEPQ9H4A4 650 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 SLC28A3Q9HAS3 691 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 TPCN1Q9ULQ1 816 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 SIP14410 1827 aa12.08□□□□□ -0.48
CDK11A-222ENST00000498810 GSTTP1A0A1W2PQM5 241 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 CFAP99D6REC4 459 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 FAM86B1E9PN63 330 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 MEIS1O00470 390 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 CHMP2AO43633 222 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 MARCH6O60337 910 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 PFKFB2O60825 505 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 EFCAB14O75071 495 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 CAND2O75155 1236 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 CYP3A4P08684 503 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 FAM86B2P0C5J1 330 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 SMCPP49901 116 aaPredicted RBP12.07□□□□□ -0.48
CDK11A-222ENST00000498810 STAT5BP51692 787 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 RBL2Q08999 1139 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 ITGB3BPQ13352 177 aaPredicted RBP12.07□□□□□ -0.48
CDK11A-222ENST00000498810 MYO9BQ13459 2157 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 NONOQ15233 471 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDK11A-222ENST00000498810 TUSC1Q2TAM9 212 aa12.07□□□□□ -0.48
CDK11A-222ENST00000498810 GALNT17Q6IS24 598 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms