RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 RDM1Q8NG50 284 aa18.09■□□□□ 0.49
LMNA-217ENST00000498722 ATP8B4Q8TF62 1192 aa18.09■□□□□ 0.49
LMNA-217ENST00000498722 TRAPPC12Q8WVT3 735 aa18.09■□□□□ 0.49
LMNA-217ENST00000498722 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
LMNA-217ENST00000498722 VAV3Q9UKW4 847 aa18.09■□□□□ 0.49
LMNA-217ENST00000498722 PCDHA12Q9UN75 941 aa18.09■□□□□ 0.49
LMNA-217ENST00000498722 MAFBQ9Y5Q3 323 aaPredicted RBP18.09■□□□□ 0.49
LMNA-217ENST00000498722 IGSF9BQ9UPX0 1349 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 HBP1O60381 514 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 CKBP12277 381 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 SELPP16109 830 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 CMA1P23946 247 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 HOXC8P31273 242 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 PRKCEQ02156 737 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 PPP2R5CQ13362 524 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 UGCGQ16739 394 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 LRRC8DQ7L1W4 858 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 KRI1Q8N9T8 703 aaKnown RBP18.08■□□□□ 0.49
LMNA-217ENST00000498722 BANK1Q8NDB2 785 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 BBXQ8WY36 941 aaPredicted RBP18.08■□□□□ 0.49
LMNA-217ENST00000498722 WNT8BQ93098 351 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 FAM167AQ96KS9 214 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 PRO3102Q9H379 93 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 CLSTN2Q9H4D0 955 aa18.08■□□□□ 0.49
LMNA-217ENST00000498722 TTC12Q9H892 705 aaPredicted RBP18.08■□□□□ 0.49
LMNA-217ENST00000498722 GBF1Q92538 1859 aa18.08■□□□□ 0.48
LMNA-217ENST00000498722 RANBP2P49792 3224 aaKnown RBP18.08■□□□□ 0.48
LMNA-217ENST00000498722 EML1O00423 815 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 NR1I2O75469 434 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 CTSHP09668 335 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 IQCF3P0C7M6 154 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 EPHB4P54760 987 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 HABP4Q5JVS0 413 aaKnown RBP18.07■□□□□ 0.48
LMNA-217ENST00000498722 ZNF618Q5T7W0 954 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 RPUSD2Q8IZ73 545 aaKnown RBP18.07■□□□□ 0.48
LMNA-217ENST00000498722 ZBTB10Q96DT7 871 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 FAM49AQ9H0Q0 323 aaPredicted RBP18.07■□□□□ 0.48
LMNA-217ENST00000498722 TMEM60Q9H2L4 133 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 TNMDQ9H2S6 317 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 TSPY26PQ9H489 355 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 IL23AQ9NPF7 189 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 PCDHB6Q9Y5E3 794 aa18.07■□□□□ 0.48
LMNA-217ENST00000498722 A0A1W2PPC1 479 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 KINO60870 393 aaKnown RBP18.06■□□□□ 0.48
LMNA-217ENST00000498722 OATP04181 439 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 OR52Z1P0C646 297 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 ATP4AP20648 1035 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 MARCKSP29966 332 aaPredicted RBP18.06■□□□□ 0.48
LMNA-217ENST00000498722 ADAM17P78536 824 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 ORC2Q13416 577 aaPredicted RBP18.06■□□□□ 0.48
LMNA-217ENST00000498722 SHHQ15465 462 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 C9orf50Q5SZB4 431 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 AXDND1Q5T1B0 1012 aaPredicted RBP18.06■□□□□ 0.48
LMNA-217ENST00000498722 TAF2Q6P1X5 1199 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 PSRC1Q6PGN9 363 aaPredicted RBP18.06■□□□□ 0.48
LMNA-217ENST00000498722 B3GNT9Q6UX72 402 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 RUFY4Q6ZNE9 571 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 RSPH3Q86UC2 560 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
LMNA-217ENST00000498722 NRBP2Q9NSY0 501 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 SEPT9Q9UHD8 586 aaPredicted RBP18.06■□□□□ 0.48
LMNA-217ENST00000498722 COL1A2P08123 1366 aa18.06■□□□□ 0.48
LMNA-217ENST00000498722 MICAL3Q7RTP6 2002 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 RFC2P35250 354 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 TRIM71Q2Q1W2 868 aaKnown RBP18.05■□□□□ 0.48
LMNA-217ENST00000498722 ZNF484Q5JVG2 852 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 MARCH8Q5T0T0 291 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 GAS2L3Q86XJ1 694 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 ZNF579Q8NAF0 562 aaKnown RBP18.05■□□□□ 0.48
LMNA-217ENST00000498722 ENGASEQ8NFI3 743 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 DNAJB3Q8WWF6 145 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 MTMR9Q96QG7 549 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.05■□□□□ 0.486e-8■□□□□ 10.7
LMNA-217ENST00000498722 GOLPH3LQ9H4A5 285 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 GRPEL1Q9HAV7 217 aa18.05■□□□□ 0.48
LMNA-217ENST00000498722 SRPRBQ9Y5M8 271 aaKnown RBP18.05■□□□□ 0.48
LMNA-217ENST00000498722 MBLAC1A4D2B0 266 aaPredicted RBP18.04■□□□□ 0.48
LMNA-217ENST00000498722 RSPH10B2B2RC85 870 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 ZNF862O60290 1169 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 FGBP02675 491 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 RSPH10BP0C881 870 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 KLRC1P26715 233 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 PSMC5P62195 406 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 CYP4A11Q02928 519 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 RBL2Q08999 1139 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 TMEM266Q2M3C6 531 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 MTHFD1LQ6UB35 978 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 ZNF365Q70YC5 407 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 METTL13Q8N6R0 699 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 FAM13BQ9NYF5 915 aa18.04■□□□□ 0.48
LMNA-217ENST00000498722 FAM237AA0A1B0GTK4 181 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 A0A1B0GVL5 298 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 POTEMA6NI47 508 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 M0QZ92 97 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 DKC1O60832 514 aaKnown RBP eCLIP18.03■□□□□ 0.48
LMNA-217ENST00000498722 P4HBP07237 508 aaKnown RBP18.03■□□□□ 0.48
LMNA-217ENST00000498722 PFKMP08237 780 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 TECP42680 631 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 QARSP47897 775 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms