RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 CLDN23Q96B33 292 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 MYADMQ96S97 322 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 RPP25Q9BUL9 199 aaKnown RBP5.77□□□□□ -1.49
CSTF1-207ENST00000498689 EDEM2Q9BV94 578 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 TEX13BQ9BXU2 312 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 WDR11Q9BZH6 1224 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 FZD8Q9H461 694 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 ZNF768Q9H5H4 540 aaKnown RBP5.77□□□□□ -1.49
CSTF1-207ENST00000498689 PRORYQ9H606 182 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 HOMER2Q9NSB8 354 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 TMEM260Q9NX78 707 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 NXF1Q9UBU9 619 aaKnown RBP5.77□□□□□ -1.49
CSTF1-207ENST00000498689 DNMT3LQ9UJW3 386 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 PPP1R9AQ9ULJ8 1098 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 PRR12Q9ULL5 1215 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 HELZP42694 1942 aaKnown RBP5.77□□□□□ -1.49
CSTF1-207ENST00000498689 GREB1LQ9C091 1923 aaPredicted RBP5.77□□□□□ -1.49
CSTF1-207ENST00000498689 MED13Q9UHV7 2174 aa5.77□□□□□ -1.49
CSTF1-207ENST00000498689 FBN1P35555 2871 aaKnown RBP5.77□□□□□ -1.49
CSTF1-207ENST00000498689 CABIN1Q9Y6J0 2220 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 MYH7P12883 1935 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 FSD2A1L4K1 749 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 B8ZZF3 427 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 SEMA3EO15041 775 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 CLASP2O75122 1294 aaKnown RBP5.76□□□□□ -1.49
CSTF1-207ENST00000498689 FGF18O76093 207 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 HSPA5P11021 654 aaKnown RBP5.76□□□□□ -1.49
CSTF1-207ENST00000498689 EPCAMP16422 314 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 CSRP1P21291 193 aaKnown RBP5.76□□□□□ -1.49
CSTF1-207ENST00000498689 COPB2P35606 906 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 ARHGAP4P98171 946 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 LY6DQ14210 128 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 PI16Q6UXB8 463 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 ERICH6Q7L0X2 663 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.76□□□□□ -1.49
CSTF1-207ENST00000498689 ADGRA1Q86SQ6 560 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 TSPYL6Q8N831 410 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 LSM14AQ8ND56 463 aaKnown RBP5.76□□□□□ -1.49
CSTF1-207ENST00000498689 LINS1Q8NG48 757 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 LPIN2Q92539 896 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 SUCLG2Q96I99 432 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 ALG1Q9BT22 464 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 RAVER2Q9HCJ3 691 aaKnown RBP5.76□□□□□ -1.49
CSTF1-207ENST00000498689 LTB4R2Q9NPC1 389 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 IL17BQ9UHF5 180 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 ZMYM2Q9UBW7 1377 aa5.76□□□□□ -1.49
CSTF1-207ENST00000498689 A0A087WV48 116 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 ASB14A6NK59 587 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 MPHOSPH10O00566 681 aaKnown RBP5.75□□□□□ -1.49
CSTF1-207ENST00000498689 ENPP3O14638 875 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 MAP4K4O95819 1239 aaPredicted RBP5.75□□□□□ -1.49
CSTF1-207ENST00000498689 NRLP54845 237 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 FAM193AP78312 1265 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 GPC5P78333 572 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 SATB1Q01826 763 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 FAM83BQ5T0W9 1011 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 HEATR6Q6AI08 1181 aaKnown RBP5.75□□□□□ -1.49
CSTF1-207ENST00000498689 CCDC149Q6ZUS6 474 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 RAB44Q7Z6P3 723 aaPredicted RBP5.75□□□□□ -1.49
CSTF1-207ENST00000498689 FMNL3Q8IVF7 1028 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 CMTR2Q8IYT2 770 aaKnown RBP5.75□□□□□ -1.49
CSTF1-207ENST00000498689 KCNV2Q8TDN2 545 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 LINC01599Q8WXQ3 324 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 DNAAF4Q8WXU2 420 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 NUP88Q99567 741 aaPredicted RBP5.75□□□□□ -1.49
CSTF1-207ENST00000498689 ARID3AQ99856 593 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 TCF25Q9BQ70 676 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 BCAS3Q9H6U6 928 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 VCPKMTQ9H867 229 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 CABP5Q9NP86 173 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 A1CFQ9NQ94 594 aaKnown RBP5.75□□□□□ -1.49
CSTF1-207ENST00000498689 ENTPD7Q9NQZ7 604 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 SLC2A4RGQ9NR83 387 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 APCP25054 2843 aa5.75□□□□□ -1.49
CSTF1-207ENST00000498689 VWA8A3KMH1 1905 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 ANKHD1Q8IWZ3 2542 aaKnown RBP5.74□□□□□ -1.49
CSTF1-207ENST00000498689 LNP1A1A4G5 178 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 CDX4O14627 284 aaPredicted RBP5.74□□□□□ -1.49
CSTF1-207ENST00000498689 CAPN9O14815 690 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 LILRB3O75022 631 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 EPN2O95208 641 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 HLA-DOAP06340 250 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 GBP2P32456 591 aaPredicted RBP5.74□□□□□ -1.49
CSTF1-207ENST00000498689 SIM1P81133 766 aaPredicted RBP5.74□□□□□ -1.49
CSTF1-207ENST00000498689 UBE3AQ05086 875 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 MLF2Q15773 248 aaPredicted RBP5.74□□□□□ -1.49
CSTF1-207ENST00000498689 LETM2Q2VYF4 491 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 ZBTB41Q5SVQ8 909 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 CCDC102BQ68D86 513 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 RUFY4Q6ZNE9 571 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 SCUBE3Q8IX30 993 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 KLHL5Q96PQ7 755 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 GPR20Q99678 358 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 VTA1Q9NP79 307 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 FAM217BQ9NTX9 383 aaPredicted RBP5.74□□□□□ -1.49
CSTF1-207ENST00000498689 GNL3LQ9NVN8 582 aaKnown RBP5.74□□□□□ -1.49
CSTF1-207ENST00000498689 PTPRDP23468 1912 aa5.74□□□□□ -1.49
CSTF1-207ENST00000498689 MYO16Q9Y6X6 1858 aa5.73□□□□□ -1.49
CSTF1-207ENST00000498689 USP17L12C9JPN9 530 aa5.73□□□□□ -1.49
CSTF1-207ENST00000498689 USP17L21D6R901 530 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms