RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 FBN1P35555 2871 aaKnown RBP6.27□□□□□ -1.41
FXN-205ENST00000498653 F12P00748 615 aaPredicted RBP6.27□□□□□ -1.41
FXN-205ENST00000498653 CR2P20023 1033 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 ELAVL4P26378 380 aaKnown RBP6.27□□□□□ -1.41
FXN-205ENST00000498653 GUCY1A2P33402 732 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 STAT3P40763 770 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 NRLP54845 237 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 OTOP3Q7RTS5 596 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 C12orf76Q8N812 135 aaPredicted RBP6.27□□□□□ -1.41
FXN-205ENST00000498653 LRRN4Q8WUT4 740 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 SSH1Q8WYL5 1049 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 KLHL5Q96PQ7 755 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 MYADMQ96S97 322 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 FZD8Q9H461 694 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 LTB4R2Q9NPC1 389 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 SLC2A4RGQ9NR83 387 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 PTPRBP23467 1997 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 ZMYM2Q9UBW7 1377 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 LAMA4Q16363 1823 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 CRYBG3Q68DQ2 2970 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 FNDC1Q4ZHG4 1894 aaPredicted RBP6.26□□□□□ -1.41
FXN-205ENST00000498653 ICE1Q9Y2F5 2266 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 SPAARA0A1B0GVQ0 90 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 PI4KAP2A4QPH2 592 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 SHISA7A6NL88 538 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 HIDE1A8MVS5 230 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 AXIN1O15169 862 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 RAD21O60216 631 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 BCAR3O75815 825 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 FGFR2P21802 821 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 COPB2P35606 906 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 SLC19A1P41440 591 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 RPS9P46781 194 aaKnown RBP6.26□□□□□ -1.41
FXN-205ENST00000498653 FZD5Q13467 585 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 MCM6Q14566 821 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 UBXN2BQ14CS0 331 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 RAB3GAP1Q15042 981 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 TAF7LQ5H9L4 462 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 DAB2IPQ5VWQ8 1189 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 PLPP4Q5VZY2 271 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 LMBR1LQ6UX01 489 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 ERICH6Q7L0X2 663 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 FMNL3Q8IVF7 1028 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 FBXO16Q8IX29 292 aaPredicted RBP6.26□□□□□ -1.41
FXN-205ENST00000498653 PI4KAP1Q8N8J0 262 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 MICAL1Q8TDZ2 1067 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 GPKOWQ92917 476 aaPredicted RBP eCLIP6.26□□□□□ -1.41
FXN-205ENST00000498653 DDX11Q96FC9 970 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 MAP10Q9P2G4 905 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 RIPK3Q9Y572 518 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 V9GY48 417 aaPredicted RBP6.26□□□□□ -1.41
FXN-205ENST00000498653 NID2Q14112 1375 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 AKAP9Q99996 3911 aa6.26□□□□□ -1.41
FXN-205ENST00000498653 FAM170BA6NMN3 283 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 VWA5AO00534 786 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 IPO8O15397 1037 aaKnown RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 DGKIO75912 1065 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 TARSP26639 723 aaKnown RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 ITPKBP27987 946 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 CPT1AP50416 773 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 CNTN2Q02246 1040 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 UBE3AQ05086 875 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 ADCY1Q08828 1119 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 PTPN14Q15678 1187 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 CCDC57Q2TAC2 916 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 DUSP28Q4G0W2 176 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 KSR2Q6VAB6 950 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 CCNI2Q6ZMN8 369 aaPredicted RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 CCDC149Q6ZUS6 474 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 ATG9AQ7Z3C6 839 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 DZIP1Q86YF9 867 aaKnown RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 SEPT8Q92599 483 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 FRAT1Q92837 279 aaPredicted RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 FCRL3Q96P31 734 aaPredicted RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 GPR20Q99678 358 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 DHX36Q9H2U1 1008 aaKnown RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 SNRKQ9NRH2 765 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 FBXO28Q9NVF7 368 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 SUPT16HQ9Y5B9 1047 aaKnown RBP6.25□□□□□ -1.41
FXN-205ENST00000498653 NBEAL1Q6ZS30 2694 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 MYH1P12882 1939 aa6.25□□□□□ -1.41
FXN-205ENST00000498653 TEX51A0A1B0GUA7 166 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 LNP1A1A4G5 178 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 H0Y626 953 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 TERTO14746 1132 aaKnown RBP6.24□□□□□ -1.41
FXN-205ENST00000498653 PDE8BO95263 885 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 TRIM16O95361 564 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 C6P13671 934 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 CD72P21854 359 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 MPLP40238 635 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 RAP1GAPP47736 663 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 SIM1P81133 766 aaPredicted RBP6.24□□□□□ -1.41
FXN-205ENST00000498653 APOBRQ0VD83 1088 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 PTK7Q13308 1070 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 SNW1Q13573 536 aaKnown RBP6.24□□□□□ -1.41
FXN-205ENST00000498653 UBAP2LQ14157 1087 aaKnown RBP6.24□□□□□ -1.41
FXN-205ENST00000498653 NR6A1Q15406 480 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 ATAT1Q5SQI0 421 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 ZKSCAN2Q63HK3 967 aa6.24□□□□□ -1.41
FXN-205ENST00000498653 IQSEC1Q6DN90 963 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms