RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 NDUFB5O43674 189 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 CHGBP05060 677 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 APPP05067 770 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 LDHCP07864 332 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 CYP21A2P08686 494 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 BMP7P18075 431 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 NME2P22392 152 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 CYP7A1P22680 504 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 RPS6KB1P23443 525 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 GSTO1P78417 241 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 TNIP1Q15025 636 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 ALX1Q15699 326 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 NAA16Q6N069 864 aaPredicted RBP6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 DBX2Q6ZNG2 339 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 TTC6Q86TZ1 520 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 C12orf40Q86WS4 652 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 TDRD7Q8NHU6 1098 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 CHMP4CQ96CF2 233 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 ERO1AQ96HE7 468 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 INTS4Q96HW7 963 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 TMX3Q96JJ7 454 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 STRBPQ96SI9 672 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 EYA3Q99504 573 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 UPF3BQ9BZI7 483 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 CBX8Q9HC52 389 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 CACNA2D2Q9NY47 1150 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 GGA3Q9NZ52 723 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 TPX2Q9ULW0 747 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 SCAF8Q9UPN6 1271 aaKnown RBP6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 SALL1Q9NSC2 1324 aa6.22□□□□□ -1.41
HMGXB4-208ENST00000498325 COL4A1P02462 1669 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 DOCK2Q92608 1830 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 E7EWF7 191 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 SLITRK5O94991 958 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 MBD4O95243 580 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 IGHA2P01877 340 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 FGAP02671 866 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 LDHBP07195 334 aaKnown RBP6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 SRFP11831 508 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 AK2P54819 239 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 FKBP1BP68106 108 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 NUCB2P80303 420 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 FGD1P98174 961 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 ZNF252P-AS1Q0IIN9 211 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 SREBF2Q12772 1141 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 TRDNQ13061 729 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 CHAF1AQ13111 956 aaPredicted RBP6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 CUL4AQ13619 759 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 ADCK5Q3MIX3 580 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 LRIT3Q3SXY7 679 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 SLC9C1Q4G0N8 1177 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 SFRP5Q5T4F7 317 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 ZBTB37Q5TC79 503 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 PRAMEF18Q5VWM3 479 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 DPP8Q6V1X1 898 aaPredicted RBP6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 C22orf34Q6ZV56 151 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 CERS3Q8IU89 383 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 KCT2Q8NC54 265 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 TBC1D16Q8TBP0 767 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 EPS8L3Q8TE67 593 aaKnown RBP6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 TBC1D22AQ8WUA7 517 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 MYLIPQ8WY64 445 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 TTC14Q96N46 770 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 FAM129BQ96TA1 746 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 GDF15Q99988 308 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 NOL10Q9BSC4 688 aaKnown RBP6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 NAPBQ9H115 298 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 CD209Q9NNX6 404 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 ZMYM6O95789 1325 aa6.21□□□□□ -1.42
HMGXB4-208ENST00000498325 ICMTO60725 284 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 LRIG2O94898 1065 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 BAG3O95817 575 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 XRCC5P13010 732 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 PDIA4P13667 645 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 IL1R1P14778 569 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 KLRK1P26718 216 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 RING1Q06587 406 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 NOL8Q76FK4 1167 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 THAP5Q7Z6K1 395 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 RALYLQ86SE5 291 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 DZIP1Q86YF9 867 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 IFNL3Q8IZI9 196 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 SUPT20HQ8NEM7 779 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 NCOA7Q8NI08 942 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 DPF2Q92785 391 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 UBE2FQ969M7 185 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 NSUN4Q96CB9 384 aaKnown RBP6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 FAM161BQ96MY7 647 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 RTFDC1Q9BY42 306 aaPredicted RBP6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 COA1Q9GZY4 146 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 VPS33BQ9H267 617 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 ARMT1Q9H993 441 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 POLLQ9UGP5 575 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 EGFL7Q9UHF1 273 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 ST14Q9Y5Y6 855 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms