RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 CACNB1Q02641 598 aaPredicted RBP8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 RNF180Q86T96 592 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 PIDD1Q9HB75 910 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 BCCIPQ9P287 314 aaKnown RBP eCLIP8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 MEIS1O00470 390 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 VAV2P52735 878 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 MIER3Q7Z3K6 550 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 TEX2Q8IWB9 1127 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 GOLGA5Q8TBA6 731 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 NACC1Q96RE7 527 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 ERGIC2Q96RQ1 377 aa8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 HMX1Q9NP08 348 aaPredicted RBP8.74□□□□□ -1.01
HLA-DMB-262ENST00000498020 ABCB11O95342 1321 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 IRS2Q9Y4H2 1338 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 CTSHP09668 335 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 CYP2C8P10632 490 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 HSPA6P17066 643 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 CLCN6P51797 869 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 CENPPQ6IPU0 288 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 MICALCLQ6ZW33 695 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM178BQ8IXR5 827 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 KCTD17Q8N5Z5 321 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 HPS3Q969F9 1004 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 CHP1Q99653 195 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 SENP6Q9GZR1 1112 aaPredicted RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 TSPYL2Q9H2G4 693 aaPredicted RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 BHMT2Q9H2M3 363 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 RNF146Q9NTX7 359 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 DDX41Q9UJV9 622 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 LAMA4Q16363 1823 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 CCDC151A5D8V7 595 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 ERICH4A6NGS2 130 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 EIF3CLB5ME19 914 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 KLRC4O43908 158 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 TCP1P17987 556 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 IFRD2Q12894 506 aaPredicted RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 COG2Q14746 738 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 TRIM65Q6PJ69 517 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 GBP6Q6ZN66 633 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 GMCL1P1Q8NEA9 526 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 TRPM4Q8TD43 1214 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 DEFB118Q96PH6 123 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 RPS6KC1Q96S38 1066 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 EIF3CQ99613 913 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 MTRQ99707 1265 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 ZNF577Q9BSK1 485 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 SYNCQ9H7C4 482 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 PITPNM2Q9BZ72 1349 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 M0R2N6 131 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 PDHXO00330 501 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 WNT10BO00744 389 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 APBB1IPQ7Z5R6 666 aaPredicted RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 IFT74Q96LB3 600 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 LARSQ9P2J5 1176 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 FBXO40Q9UH90 709 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 FEM1BQ9UK73 627 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 PRR12Q9ULL5 1215 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 IKBKGQ9Y6K9 419 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 POTEFA5A3E0 1075 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 DKC1O60832 514 aaKnown RBP eCLIP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 EIF4A3P38919 411 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 EXOC3L4Q17RC7 722 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 POTEEQ6S8J3 1075 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 SLC51AQ86UW1 340 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 ARRDC4Q8NCT1 418 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 SELENOOQ9BVL4 669 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 IRX2Q9BZI1 471 aaPredicted RBP8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM107BQ9H098 131 aa8.73□□□□□ -1.01
HLA-DMB-262ENST00000498020 IGKV6D-41A0A0C4DH26 115 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 A0A1W2PQJ5 194 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 PABPN1LA6NDY0 278 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 KIF11P52732 1056 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 FIGNQ5HY92 759 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 PNMA5Q96PV4 448 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 HYOU1Q9Y4L1 999 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 BZW2Q9Y6E2 419 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 CICQ96RK0 1608 aaPredicted RBP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 EXOC3O60645 756 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 AFPP02771 609 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 PMS1P54277 932 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 RNF207Q6ZRF8 634 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 ZFPM1Q8IX07 1006 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 LRRC45Q96CN5 670 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 PARD6BQ9BYG5 372 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 BLOC1S4Q9NUP1 217 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM198AQ9UFP1 575 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 ADCY3O60266 1144 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 YBX3P16989 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 RPA1P27694 616 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 PBX1P40424 430 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 CYP27A1Q02318 531 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 SLC35G1Q2M3R5 365 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 SFR1Q86XK3 245 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 TSNARE1Q96NA8 513 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 IWS1Q96ST2 819 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms