RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CALML4Q96GE6 196 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 CDK5RAP3Q96JB5 506 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 FAM167AQ96KS9 214 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 PIEZO1Q92508 2521 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 MUTP22033 750 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 TXLNAP40222 546 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 PRKCEQ02156 737 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 GRIN2CQ14957 1233 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 XKR3Q5GH77 459 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 NFRKBQ6P4R8 1299 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 SLC39A5Q6ZMH5 540 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 RASSF8Q8NHQ8 419 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 ATP8B4Q8TF62 1192 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 BBXQ8WY36 941 aaPredicted RBP22.4■■□□□ 1.18
CTSD-206ENST00000497544 ASB2Q96Q27 587 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 SEZ6LQ9BYH1 1024 aa22.4■■□□□ 1.18
CTSD-206ENST00000497544 KDM3AQ9Y4C1 1321 aa22.39■■□□□ 1.18
CTSD-206ENST00000497544 ARVCFO00192 962 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 SLC26A4O43511 780 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 OATP04181 439 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 ATN1P54259 1190 aaPredicted RBP22.39■■□□□ 1.17
CTSD-206ENST00000497544 AXDND1Q5T1B0 1012 aaPredicted RBP22.39■■□□□ 1.17
CTSD-206ENST00000497544 ADALQ6DHV7 355 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 OTUD6AQ7L8S5 288 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 PPP1R13LQ8WUF5 828 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 EPSTI1Q96J88 318 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 NACC1Q96RE7 527 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 MMTAG2Q9BU76 263 aaKnown RBP22.39■■□□□ 1.17
CTSD-206ENST00000497544 CCSER1Q9C0I3 900 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 HDAC6Q9UBN7 1215 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 CCDC39Q9UFE4 941 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 KIAA1024Q9UPX6 916 aa22.39■■□□□ 1.17
CTSD-206ENST00000497544 GRIN2DO15399 1336 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 TCF20Q9UGU0 1960 aaKnown RBP22.38■■□□□ 1.17
CTSD-206ENST00000497544 GOLGA6L4A6NEF3 574 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 LYPLA2O95372 231 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 SMIM10L2AP0DMW4 78 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 SMIM10L2BP0DMW5 78 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 TPRNQ4KMQ1 711 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 USP49Q70CQ1 688 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 SNX27Q96L92 541 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 C1QTNF1Q9BXJ1 281 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 NT5C3AQ9H0P0 336 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 WRAP73Q9P2S5 460 aaPredicted RBP22.38■■□□□ 1.17
CTSD-206ENST00000497544 PRKAG2Q9UGJ0 569 aa22.38■■□□□ 1.17
CTSD-206ENST00000497544 SEPT9Q9UHD8 586 aaPredicted RBP22.38■■□□□ 1.17
CTSD-206ENST00000497544 RRN3P2A6NIE6 340 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 GNAT1P11488 350 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 XRCC6P12956 609 aaKnown RBP eCLIP22.37■■□□□ 1.17
CTSD-206ENST00000497544 INSRRP14616 1297 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 YWHABP31946 246 aaKnown RBP22.37■■□□□ 1.17
CTSD-206ENST00000497544 PTPN11Q06124 597 aaPredicted RBP22.37■■□□□ 1.17
CTSD-206ENST00000497544 PPFIA1Q13136 1202 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 ECM1Q16610 540 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 SHC4Q6S5L8 630 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 GBP4Q96PP9 640 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 PLIN2Q99541 437 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 DDX19AQ9NUU7 478 aaKnown RBP22.37■■□□□ 1.17
CTSD-206ENST00000497544 FAM13BQ9NYF5 915 aa22.37■■□□□ 1.17
CTSD-206ENST00000497544 NRCAMQ92823 1304 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 TRIP12Q14669 1992 aaPredicted RBP22.36■■□□□ 1.17
CTSD-206ENST00000497544 A0A087WWV3 80 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 C17orf102A2RUQ5 167 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 STBD1O95210 358 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 IGBP1P78318 339 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 ZNF484Q5JVG2 852 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 HYIQ5T013 277 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 POTEGQ6S5H5 508 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 SESTD1Q86VW0 696 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 KCTD17Q8N5Z5 321 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 SLC43A3Q8NBI5 491 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 PIGOQ8TEQ8 1089 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 CCDC43Q96MW1 224 aaKnown RBP22.36■■□□□ 1.17
CTSD-206ENST00000497544 NIFKQ9BYG3 293 aaKnown RBP22.36■■□□□ 1.17
CTSD-206ENST00000497544 SETD4Q9NVD3 440 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 THEGQ9P2T0 379 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 GTF2IRD1Q9UHL9 959 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 DNM3Q9UQ16 869 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 HCN4Q9Y3Q4 1203 aa22.36■■□□□ 1.17
CTSD-206ENST00000497544 ZBTB39O15060 712 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 CMA1P23946 247 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 CDK7P50613 346 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 GRB10Q13322 594 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 KARSQ15046 597 aaKnown RBP22.35■■□□□ 1.17
CTSD-206ENST00000497544 GRIK4Q16099 956 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 MTERF2Q49AM1 385 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 XKR9Q5GH70 373 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 CLEC17AQ6ZS10 378 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 ANO5Q75V66 913 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 PNMA5Q96PV4 448 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 ANKEF1Q9NU02 776 aa22.35■■□□□ 1.17
CTSD-206ENST00000497544 MROH7Q68CQ1 1323 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 RTP1P59025 263 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 C1orf53Q5VUE5 145 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 RRAGBQ5VZM2 374 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 RESP18Q5W5W9 173 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 PPM1EQ8WY54 764 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 CEP170P1Q96L14 293 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 PANK2Q9BZ23 570 aa22.34■■□□□ 1.17
CTSD-206ENST00000497544 COL1A2P08123 1366 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms