RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 KATNBL1Q9H079 304 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 OR10A5Q9H207 317 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 IFT57Q9NWB7 429 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 OXSMQ9NWU1 459 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 INVSQ9Y283 1065 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 MYCLP1P12525 358 aaPredicted RBP6.98□□□□□ -1.29
SNX13-211ENST00000496855 SLC9A1P19634 815 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
SNX13-211ENST00000496855 KANK2Q63ZY3 851 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 REXO1L1PQ8IX06 675 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 KBTBD2Q8IY47 623 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 CXorf38Q8TB03 319 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 CALML6Q8TD86 181 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 E2F7Q96AV8 911 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 ELF4Q99607 663 aaPredicted RBP6.98□□□□□ -1.29
SNX13-211ENST00000496855 SLKQ9H2G2 1235 aaPredicted RBP6.98□□□□□ -1.29
SNX13-211ENST00000496855 SPO11Q9Y5K1 396 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 PDE8AO60658 829 aa6.97□□□□□ -1.29
SNX13-211ENST00000496855 CUTAO60888 179 aa6.97□□□□□ -1.29
SNX13-211ENST00000496855 PTX3P26022 381 aaPredicted RBP6.97□□□□□ -1.29
SNX13-211ENST00000496855 ALDH6A1Q02252 535 aaKnown RBP6.97□□□□□ -1.29
SNX13-211ENST00000496855 TOP3AQ13472 1001 aaPredicted RBP6.97□□□□□ -1.29
SNX13-211ENST00000496855 SEPT7Q16181 437 aaKnown RBP6.97□□□□□ -1.29
SNX13-211ENST00000496855 PLEKHH3Q7Z736 793 aa6.97□□□□□ -1.29
SNX13-211ENST00000496855 C16orf92Q96LL3 132 aa6.97□□□□□ -1.29
SNX13-211ENST00000496855 FOXB1Q99853 325 aa6.97□□□□□ -1.29
SNX13-211ENST00000496855 H2AFY2Q9P0M6 372 aaPredicted RBP6.97□□□□□ -1.29
SNX13-211ENST00000496855 FBXO10Q9UK96 956 aa6.97□□□□□ -1.29
SNX13-211ENST00000496855 CSF2RBP32927 897 aa6.96□□□□□ -1.3
SNX13-211ENST00000496855 ADCY8P40145 1251 aa6.96□□□□□ -1.3
SNX13-211ENST00000496855 CD83Q01151 205 aa6.96□□□□□ -1.3
SNX13-211ENST00000496855 CHTF18Q8WVB6 975 aa6.96□□□□□ -1.3
SNX13-211ENST00000496855 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.96□□□□□ -1.3
SNX13-211ENST00000496855 THG1LQ9NWX6 298 aaKnown RBP6.96□□□□□ -1.3
SNX13-211ENST00000496855 MAPRE3Q9UPY8 281 aa6.96□□□□□ -1.3
SNX13-211ENST00000496855 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 FOXD2O60548 495 aaPredicted RBP6.95□□□□□ -1.3
SNX13-211ENST00000496855 ETV4P43268 484 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 SCNN1BP51168 640 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 EPHA7Q15375 998 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 GPR155Q7Z3F1 870 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 RALYLQ86SE5 291 aaKnown RBP6.95□□□□□ -1.3
SNX13-211ENST00000496855 NME9Q86XW9 330 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 EFHBQ8N7U6 833 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 SMC1BQ8NDV3 1235 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 OR2W6PQ8NHA6 318 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 CARD11Q9BXL7 1154 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 ZDHHC5Q9C0B5 715 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 TOMM22Q9NS69 142 aa6.95□□□□□ -1.3
SNX13-211ENST00000496855 B4GALT4O60513 344 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 CLSTN1O94985 981 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 PLATP00750 562 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 PRLP01236 227 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 APEX1P27695 318 aaKnown RBP6.94□□□□□ -1.3
SNX13-211ENST00000496855 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
SNX13-211ENST00000496855 SART3Q15020 963 aaKnown RBP6.94□□□□□ -1.3
SNX13-211ENST00000496855 SURF1Q15526 300 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 TBC1D10BQ4KMP7 808 aaPredicted RBP6.94□□□□□ -1.3
SNX13-211ENST00000496855 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 ESRP1Q6NXG1 681 aaKnown RBP6.94□□□□□ -1.3
SNX13-211ENST00000496855 OTOP2Q7RTS6 562 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 IFNL2Q8IZJ0 200 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 LEO1Q8WVC0 666 aaPredicted RBP6.94□□□□□ -1.3
SNX13-211ENST00000496855 MAML3Q96JK9 1138 aa6.94□□□□□ -1.3
SNX13-211ENST00000496855 UBA6A0AVT1 1052 aaPredicted RBP6.93□□□□□ -1.3
SNX13-211ENST00000496855 LAMTOR5O43504 91 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 MAFO75444 373 aaPredicted RBP6.93□□□□□ -1.3
SNX13-211ENST00000496855 ZNF888P0CJ79 500 aaPredicted RBP6.93□□□□□ -1.3
SNX13-211ENST00000496855 SYN1P17600 705 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 KCNQ1P51787 676 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 KPNA1P52294 538 aaPredicted RBP6.93□□□□□ -1.3
SNX13-211ENST00000496855 SLC6A3Q01959 620 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 ROM1Q03395 351 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 MOGSQ13724 837 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 EIF4HQ15056 248 aaKnown RBP6.93□□□□□ -1.3
SNX13-211ENST00000496855 TTC38Q5R3I4 469 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 TMEM200BQ69YZ2 307 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 GRAMD4Q6IC98 578 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 THNSL2Q86YJ6 484 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 ZZZ3Q8IYH5 903 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 BDH2Q9BUT1 245 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 PTPN22Q9Y2R2 807 aa6.93□□□□□ -1.3
SNX13-211ENST00000496855 A0A0G2JNJ9 132 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 HMGCRP04035 888 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 RGS3P49796 1198 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 PPP2CBP62714 309 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 PPP2CAP67775 309 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 OCRLQ01968 901 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 ADCY1Q08828 1119 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 ARHGEF18Q6ZSZ5 1173 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 RNF180Q86T96 592 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 PASD1Q8IV76 773 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 GPR101Q96P66 508 aaPredicted RBP6.92□□□□□ -1.3
SNX13-211ENST00000496855 Q9UFV3 132 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 CDC42EP3Q9UKI2 254 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 SLC4A7Q9Y6M7 1214 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 ZNF536O15090 1300 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 KRTAP9-7A8MTY7 169 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 TGM5O43548 720 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 EPHB4P54760 987 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms