RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 SLC1A6P48664 564 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 YARSP54577 528 aaKnown RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 TBC1D25Q3MII6 688 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 RPLP0P6Q8NHW5 317 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 NEUROD4Q9HD90 331 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SENP1Q9P0U3 644 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SCAF8Q9UPN6 1271 aaKnown RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 LRRC14BA6NHZ5 514 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 S100A6P06703 90 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SERPINB1P30740 379 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 CASP2P42575 452 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SMCO1Q147U7 214 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 KRT24Q2M2I5 525 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 TAF1BQ53T94 588 aaPredicted RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 ABI1Q8IZP0 508 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 RDH13Q8NBN7 331 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 HPS1Q92902 700 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SKA1Q96BD8 255 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 TRPM5Q9NZQ8 1165 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 ZSWIM5Q9P217 1185 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 L3MBTL1Q9Y468 752 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PDCD5O14737 125 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 CALB1P05937 261 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 FGFR2P21802 821 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 DEF8Q6ZN54 512 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 ARHGEF18Q6ZSZ5 1173 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SNX25Q9H3E2 840 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 AZI2Q9H6S1 392 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 ZCCHC6Q5VYS8 1495 aaKnown RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 GFPT2O94808 682 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 MAP3K6O95382 1288 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 P4HBP07237 508 aaKnown RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 RAD51Q06609 339 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 CCDC85BQ15834 202 aaPredicted RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 SPATA1Q5VX52 437 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PRPF40BQ6NWY9 871 aaKnown RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 FRA10AC1Q70Z53 315 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 CENPUQ71F23 418 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 KIAA0825Q8IV33 1275 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SPICE1Q8N0Z3 855 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 FLCNQ8NFG4 579 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 ADPGKQ9BRR6 497 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 ADCY6O43306 1168 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PGAM1P18669 254 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 EIF2B2P49770 351 aaKnown RBP6.24□□□□□ -1.41
USF3-204ENST00000496826 HSDL2Q6YN16 418 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SUPT20HQ8NEM7 779 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 LRRC46Q96FV0 321 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 ANKRD2Q9GZV1 360 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 KRT84Q9NSB2 600 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 ATP6V1HQ9UI12 483 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 CDC23Q9UJX2 597 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 A0A0X1KG70 313 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PDE3AQ14432 1141 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SPANXN2Q5MJ10 180 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 PRUNE1Q86TP1 453 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 EXOC6Q8TAG9 804 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 TRERF1Q96PN7 1200 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 SEL1LQ9UBV2 794 aa6.24□□□□□ -1.41
USF3-204ENST00000496826 STK25O00506 426 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 STX11O75558 287 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 UQCRBP14927 111 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 CPA2P48052 419 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ITGA1P56199 1179 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 GNG11P61952 73 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ILF2Q12905 390 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 C4orf46Q504U0 113 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ZNF658Q5TYW1 1059 aaPredicted RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 OOSP2Q86WS3 158 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ZNF555Q8NEP9 628 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 MAML1Q92585 1016 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SPOCK3Q9BQ16 436 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 KLHL25Q9H0H3 589 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TBC1D23Q9NUY8 699 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 PCMTD2Q9NV79 361 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ZNF180Q9UJW8 692 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 GRXCR2A6NFK2 248 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ALOX15P16050 662 aaPredicted RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 PIK3R1P27986 724 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 QARSP47897 775 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 RXRGP48443 463 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 MORC3Q14149 939 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 LACTB2Q53H82 288 aaPredicted RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 FBXW10Q5XX13 1052 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ALKBH5Q6P6C2 394 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 SMCR8Q8TEV9 937 aaPredicted RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 FAR1Q8WVX9 515 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TRIM51Q9BSJ1 452 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 PICK1Q9NRD5 415 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 PDRG1Q9NUG6 133 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ZNF229Q9UJW7 825 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 CLEC11AQ9Y240 323 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 C5orf58C9J3I9 102 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 XPO1O14980 1071 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 AXIN1O15169 862 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 EXOC3O60645 756 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 VCAM1P19320 739 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SERPINB8P50452 374 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TPTEP56180 551 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms