RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 DEFB129Q9H1M3 183 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 KCNF1Q9H3M0 494 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 TMEM165Q9HC07 324 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 SH3GLB2Q9NR46 395 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CWC15Q9P013 229 aaKnown RBP6.84□□□□□ -1.31
SSBP1-213ENST00000496622 NYAP2Q9P242 653 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 HACL1Q9UJ83 578 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 TUBE1Q9UJT0 475 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ZBTB21Q9ULJ3 1066 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 MAP4K5Q9Y4K4 846 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 DLEC1Q9Y238 1755 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ECM29Q5VYK3 1845 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 PLIN4Q96Q06 1357 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 FAM237AA0A1B0GTK4 181 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 KIF5CO60282 957 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 PEX10O60683 326 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 DDNO94850 711 aaPredicted RBP6.83□□□□□ -1.32
SSBP1-213ENST00000496622 BMP3P12645 472 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 ADCY7P51828 1080 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 NLRP12P59046 1061 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 DPYDQ12882 1025 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 DTHD1Q6ZMT9 781 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 AGBL3Q8NEM8 1001 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 ENOX1Q8TC92 643 aaKnown RBP6.83□□□□□ -1.32
SSBP1-213ENST00000496622 TEPSINQ96N21 525 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 ZNF446Q9NWS9 450 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 MAP3K20Q9NYL2 800 aaKnown RBP6.83□□□□□ -1.32
SSBP1-213ENST00000496622 N6AMT1Q9Y5N5 214 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 COMMD10Q9Y6G5 202 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 ATRNL1Q5VV63 1379 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 LAMB1P07942 1786 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 OPLAHO14841 1288 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 NEMFO60524 1076 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 SMC2O95347 1197 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 CAP2P40123 477 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 RPS6KA3P51812 740 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 ZNF75DP51815 510 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 RWDD2BP57060 319 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 GPATCH4Q5T3I0 446 aaKnown RBP6.83□□□□□ -1.32
SSBP1-213ENST00000496622 ANGEL2Q5VTE6 544 aaKnown RBP6.83□□□□□ -1.32
SSBP1-213ENST00000496622 CPXCR1Q8N123 301 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 BICD1Q96G01 975 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 ZNF341Q9BYN7 854 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 XPO4Q9C0E2 1151 aaKnown RBP6.83□□□□□ -1.32
SSBP1-213ENST00000496622 HOMER2Q9NSB8 354 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 SAMSN1Q9NSI8 373 aaKnown RBP6.83□□□□□ -1.32
SSBP1-213ENST00000496622 TBC1D7Q9P0N9 293 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 IFNKQ9P0W0 207 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 PGAP2Q9UHJ9 254 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 PRR12Q9ULL5 1215 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 PYCARDQ9ULZ3 195 aa6.83□□□□□ -1.32
SSBP1-213ENST00000496622 MEIS2O14770 477 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 CFBP00751 764 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 CA8P35219 290 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 UBA7P41226 1012 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 HIRAP54198 1017 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 PTK7Q13308 1070 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 FXNQ16595 210 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 ECM1Q16610 540 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 TTC31Q49AM3 519 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 HSP90B2PQ58FF3 399 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 SYT10Q6XYQ8 523 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 TRMT1LQ7Z2T5 733 aaKnown RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 SMARCE1Q969G3 411 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 FERMT2Q96AC1 680 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 ZNF395Q9H8N7 513 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 GDAQ9Y2T3 454 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 MYO3BQ8WXR4 1341 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 MKI67P46013 3256 aaKnown RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 SMCHD1A6NHR9 2005 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 PHF20L1A8MW92 1017 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 CA12O43570 354 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 IMPDH2P12268 514 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 STAT3P40763 770 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 TRAPPC10P48553 1259 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 SOX10P56693 466 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 RELBQ01201 579 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 TBC1D8BQ0IIM8 1120 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 KCNK18Q7Z418 384 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 PLA2G4DQ86XP0 818 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 CRIPAKQ8N1N5 446 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 TRIM11Q96F44 468 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 ZBED3Q96IU2 234 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 WNK4Q96J92 1243 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 CENPOQ9BU64 300 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 RSPH9Q9H1X1 276 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 HERC5Q9UII4 1024 aaKnown RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 G3BP2Q9UN86 482 aaKnown RBP6.82□□□□□ -1.32
SSBP1-213ENST00000496622 ZKSCAN5Q9Y2L8 839 aa6.82□□□□□ -1.32
SSBP1-213ENST00000496622 BOLA2-SMG1P6H3BVE0 249 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 FZD9O00144 591 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 NKRFO15226 690 aaKnown RBP eCLIP6.81□□□□□ -1.32
SSBP1-213ENST00000496622 OR52Z1P0C646 297 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 PLCG1P19174 1290 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 STAT6P42226 847 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 STAT2P52630 851 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 KIF4BQ2VIQ3 1234 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 SYDE2Q5VT97 1194 aa6.81□□□□□ -1.32
SSBP1-213ENST00000496622 KRT25Q7Z3Z0 450 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms