RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 ZFHX4Q86UP3 3567 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 OTOGLQ3ZCN5 2332 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 HOXA2O43364 376 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
ATG3-209ENST00000496423 NFX1Q12986 1120 aaKnown RBP13.53□□□□□ -0.24
ATG3-209ENST00000496423 KCNT2Q6UVM3 1135 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 SLC24A5Q71RS6 500 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 CABP7Q86V35 215 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 NME8Q8N427 588 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 GLG1Q92896 1179 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 SHDQ96IW2 340 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 ERAP1Q9NZ08 941 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 FBXO4Q9UKT5 387 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
ATG3-209ENST00000496423 PCDHGA2Q9Y5H1 932 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 CFAP47Q6ZTR5 3102 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 FRYLO94915 3013 aa13.53□□□□□ -0.24
ATG3-209ENST00000496423 PKD1L2Q7Z442 2459 aa13.52□□□□□ -0.24
ATG3-209ENST00000496423 C2orf71A6NGG8 1288 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 FIBPO43427 364 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 LAMTOR5O43504 91 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 TBC1D4O60343 1298 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 CLASP2O75122 1294 aaKnown RBP13.52□□□□□ -0.25
ATG3-209ENST00000496423 CXCL14O95715 111 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 FGRP09769 529 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 QRICH1Q2TAL8 776 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 CCDC178Q5BJE1 867 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 FAM102BQ5T8I3 360 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 PPFIBP1Q86W92 1011 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 TRIM50Q86XT4 487 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 C12orf76Q8N812 135 aaPredicted RBP13.52□□□□□ -0.25
ATG3-209ENST00000496423 NETO1Q8TDF5 533 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 CELF4Q9BZC1 486 aaKnown RBP13.52□□□□□ -0.25
ATG3-209ENST00000496423 FAM49AQ9H0Q0 323 aaPredicted RBP13.52□□□□□ -0.25
ATG3-209ENST00000496423 CWH43Q9H720 699 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 IGSF9BQ9UPX0 1349 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 LOXHD1Q8IVV2 1947 aa13.52□□□□□ -0.25
ATG3-209ENST00000496423 MBLAC1A4D2B0 266 aaPredicted RBP13.51□□□□□ -0.25
ATG3-209ENST00000496423 KRBA1A5PL33 1030 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 CARNS1A5YM72 827 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 SRFP11831 508 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 PDE4AP27815 886 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 GHRHRQ02643 423 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 STAMQ92783 540 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 SEC62Q99442 399 aaKnown RBP13.51□□□□□ -0.25
ATG3-209ENST00000496423 ADAM2Q99965 735 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 SENP7Q9BQF6 1050 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 BCO2Q9BYV7 579 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
ATG3-209ENST00000496423 SMARCAD1Q9H4L7 1026 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
ATG3-209ENST00000496423 RGS18Q9NS28 235 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 TMEM161AQ9NX61 479 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
ATG3-209ENST00000496423 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 GCOM1H8Y6P7 765 aaPredicted RBP13.5□□□□□ -0.25
ATG3-209ENST00000496423 GPR182O15218 404 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 POLR2MP0CAP2 368 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
ATG3-209ENST00000496423 MS4A1P11836 297 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 TCF7P36402 384 aaPredicted RBP13.5□□□□□ -0.25
ATG3-209ENST00000496423 IGBP1P78318 339 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 SP4Q02446 784 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 TMC5Q6UXY8 1006 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 GPR149Q86SP6 731 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.25
ATG3-209ENST00000496423 TMEM117Q9H0C3 514 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 CPVLQ9H3G5 476 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 SFXN1Q9H9B4 322 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 FAM208BQ5VWN6 2430 aa13.5□□□□□ -0.25
ATG3-209ENST00000496423 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 SLC30A4O14863 429 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 NARSO43776 548 aaKnown RBP13.49□□□□□ -0.25
ATG3-209ENST00000496423 RPS6KA5O75582 802 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 ARP10275 920 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 RLBP1P12271 317 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 GBP2P32456 591 aaPredicted RBP13.49□□□□□ -0.25
ATG3-209ENST00000496423 KRT76Q01546 638 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 LETM2Q2VYF4 491 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 ELMSAN1Q6PJG2 1045 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 DCLRE1AQ6PJP8 1040 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 NLRX1Q86UT6 975 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 FCHSD1Q86WN1 690 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 LRRC43Q8N309 656 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 SEPT1Q8WYJ6 367 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 BCAS3Q9H6U6 928 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 KAT14Q9H8E8 782 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 SPATA6Q9NWH7 488 aaPredicted RBP13.49□□□□□ -0.25
ATG3-209ENST00000496423 ZSCAN32Q9NX65 697 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 DLGAP2Q9P1A6 1054 aa13.49□□□□□ -0.25
ATG3-209ENST00000496423 SMG5Q9UPR3 1016 aaKnown RBP13.49□□□□□ -0.25
ATG3-209ENST00000496423 USP24Q9UPU5 2620 aa13.48□□□□□ -0.25
ATG3-209ENST00000496423 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms