RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 DKC1O60832 514 aaKnown RBP eCLIP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 ATG7O95352 703 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 SUPT20HL2P0C7V6 817 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 TGFB3P10600 412 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 PRKCSHP14314 528 aaPredicted RBP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 NMT1P30419 496 aaKnown RBP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 MTIF2P46199 727 aaKnown RBP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 NPEPPSP55786 919 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 UBXN1Q04323 297 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 GOLGA8FQ08AF8 430 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 GOLGA8DPQ0D2H9 430 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 XKR9Q5GH70 373 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 PLA2G4FQ68DD2 849 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 MORC4Q8TE76 937 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 CCDC43Q96MW1 224 aaKnown RBP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 TRAF3IP3Q9Y228 551 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 ITIH6Q6UXX5 1313 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 SYNGAP1Q96PV0 1343 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 PASKQ96RG2 1323 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 EIF3DO15371 548 aaKnown RBP eCLIP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 MIIPQ5JXC2 388 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 ODR4Q5SWX8 454 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 MAEAQ7L5Y9 396 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 ZNF720Q7Z2F6 126 aa18.09■□□□□ 0.49
HLA-A-208ENST00000496081 ZC3H3Q8IXZ2 948 aaKnown RBP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 PARK7Q99497 189 aaKnown RBP18.09■□□□□ 0.49
HLA-A-208ENST00000496081 PLXNB2O15031 1838 aa18.08■□□□□ 0.49
HLA-A-208ENST00000496081 MCM3APO60318 1980 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 LOC102724159A0A0B4J2E5 919 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 PDXKO00764 312 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 FARP2O94887 1054 aaPredicted RBP18.08■□□□□ 0.48
HLA-A-208ENST00000496081 KCNA1Q09470 495 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 NEDD9Q14511 834 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 PWP2Q15269 919 aaKnown RBP18.08■□□□□ 0.48
HLA-A-208ENST00000496081 ZC2HC1CQ53FD0 456 aaPredicted RBP18.08■□□□□ 0.48
HLA-A-208ENST00000496081 CEP135Q66GS9 1140 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 OTUD6AQ7L8S5 288 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 RASAL3Q86YV0 1011 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 FAM178BQ8IXR5 827 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 TC2NQ8N9U0 490 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 CEP63Q96MT8 703 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 NOC4LQ9BVI4 516 aaKnown RBP18.08■□□□□ 0.48
HLA-A-208ENST00000496081 IGSF9BQ9UPX0 1349 aa18.08■□□□□ 0.48
HLA-A-208ENST00000496081 TPM2P07951 284 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 DNM2P50570 870 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 ZNF157P51786 506 aaPredicted RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 ADKP55263 362 aaKnown RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 RBL2Q08999 1139 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 NOLC1Q14978 699 aaKnown RBP eCLIP18.07■□□□□ 0.487e-8■□□□□ 8.3
HLA-A-208ENST00000496081 LY6KQ17RY6 165 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 TIPINQ9BVW5 301 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 MYH9P35579 1960 aaKnown RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 A0A1W2PQC6 194 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 PES1O00541 588 aaKnown RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 ARIH2O95376 493 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 ADORA2AP29274 412 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 PRKCEQ02156 737 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 ADAM9Q13443 819 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 ZNF792Q3KQV3 632 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 SAPCD2Q86UD0 394 aa18.07■□□□□ 0.48
HLA-A-208ENST00000496081 TYW1Q9NV66 732 aaKnown RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 LARSQ9P2J5 1176 aaKnown RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 MAFBQ9Y5Q3 323 aaPredicted RBP18.07■□□□□ 0.48
HLA-A-208ENST00000496081 PLXNA1Q9UIW2 1896 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 ARID2Q68CP9 1835 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 IGKV6D-21A0A0A0MT36 114 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 GSTTP1A0A1W2PQM5 241 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 STRNO43815 780 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 CALUO43852 315 aaPredicted RBP18.06■□□□□ 0.48
HLA-A-208ENST00000496081 GGPS1O95749 300 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 GYPCP04921 128 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 KCNV1Q6PIU1 500 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 PPFIBP1Q86W92 1011 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
HLA-A-208ENST00000496081 ABRAQ8N0Z2 381 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 CEP170P1Q96L14 293 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 STRA6Q9BX79 667 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 ZNF302Q9NR11 478 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 SPTLC3Q9NUV7 552 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.06■□□□□ 0.48
HLA-A-208ENST00000496081 ZMYM2Q9UBW7 1377 aa18.06■□□□□ 0.48
HLA-A-208ENST00000496081 ASB14A6NK59 587 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 AKR1B15C9JRZ8 316 aaPredicted RBP18.05■□□□□ 0.48
HLA-A-208ENST00000496081 TGFB1I1O43294 461 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 PLS3P13797 630 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 ATP4AP20648 1035 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 NR2F2P24468 414 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 MAN2A1Q16706 1144 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 FAM110CQ1W6H9 321 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 VWA3BQ502W6 1294 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 XKR3Q5GH77 459 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 METTL7BQ6UX53 244 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 KSR1Q8IVT5 923 aa18.05■□□□□ 0.48
HLA-A-208ENST00000496081 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms