RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 MED4Q9NPJ6 270 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 FBXL5Q9UKA1 691 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 FRMPD4Q14CM0 1322 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 RBBP6Q7Z6E9 1792 aaKnown RBP16.81■□□□□ 0.28
CALD1-222ENST00000495522 CCDC66A2RUB6 948 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 CLIC2O15247 247 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 TGFB1I1O43294 461 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 CXCR5P32302 372 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 CASP4P49662 377 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 KCNA1Q09470 495 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 KIAA0753Q2KHM9 967 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 IRF2BP2Q7Z5L9 587 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 CCDC102AQ96A19 550 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 SLC35C1Q96A29 364 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 NACC1Q96RE7 527 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 PSMB7Q99436 277 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 KCND2Q9NZV8 630 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 RNF14Q9UBS8 474 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 SEL1LQ9UBV2 794 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 ADAM21Q9UKJ8 722 aa16.81■□□□□ 0.28
CALD1-222ENST00000495522 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
CALD1-222ENST00000495522 UBE4BO95155 1302 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 ZMYM2Q9UBW7 1377 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 SHTN1A0MZ66 631 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 GTPBP10A4D1E9 387 aaKnown RBP16.8■□□□□ 0.28
CALD1-222ENST00000495522 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 N4BP1O75113 896 aaKnown RBP16.8■□□□□ 0.28
CALD1-222ENST00000495522 PALMO75781 387 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 ZMYND10O75800 440 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 KLRC1P26715 233 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 CAP2P40123 477 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 FAM83AQ86UY5 434 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 TEKT3Q9BXF9 490 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
CALD1-222ENST00000495522 PSD3Q9NYI0 1048 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 VPS18Q9P253 973 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
CALD1-222ENST00000495522 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
CALD1-222ENST00000495522 BTNL10A8MVZ5 291 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 PPP1R12BO60237 982 aaPredicted RBP16.79■□□□□ 0.28
CALD1-222ENST00000495522 NMT1P30419 496 aaKnown RBP16.79■□□□□ 0.28
CALD1-222ENST00000495522 GYS2P54840 703 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 PTK2Q05397 1052 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 CFAP221Q4G0U5 840 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
CALD1-222ENST00000495522 STXBP4Q6ZWJ1 553 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 MIGA2Q7L4E1 593 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 UNC45AQ9H3U1 944 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 PCDHB13Q9Y5F0 798 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 ZBTB39O15060 712 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 ARP10275 920 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 ANXA13P27216 316 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 POLD1P28340 1107 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
CALD1-222ENST00000495522 PRKCIP41743 596 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 AARSP49588 968 aaKnown RBP eCLIP16.79■□□□□ 0.28
CALD1-222ENST00000495522 ZNF131P52739 623 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 SLC20A2Q08357 652 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 ZNF571Q7Z3V5 609 aaPredicted RBP16.79■□□□□ 0.28
CALD1-222ENST00000495522 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 FAM186BQ8IYM0 893 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 MTMR14Q8NCE2 650 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 BORCS6Q96GS4 357 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 LRRC1Q9BTT6 524 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
CALD1-222ENST00000495522 DEFB129Q9H1M3 183 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 SIX2Q9NPC8 291 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 GCNT4Q9P109 453 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 ODF2LQ9ULJ1 636 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 HPCAL4Q9UM19 191 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 COL4A5P29400 1685 aa16.79■□□□□ 0.28
CALD1-222ENST00000495522 MYBL2P10244 700 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 MKNK1Q9BUB5 465 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 PACSIN1Q9BY11 444 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 FAN1Q9Y2M0 1017 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 IPO5O00410 1097 aaKnown RBP16.78■□□□□ 0.28
CALD1-222ENST00000495522 ASNSP08243 561 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
CALD1-222ENST00000495522 JAM2P57087 298 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 ZC2HC1CQ53FD0 456 aaPredicted RBP16.78■□□□□ 0.28
CALD1-222ENST00000495522 MEI1Q5TIA1 1274 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 B3GNT9Q6UX72 402 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 ZNF720Q7Z2F6 126 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 FAM178BQ8IXR5 827 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 AGBL3Q8NEM8 1001 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 RIT2Q99578 217 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 MXRA8Q9BRK3 442 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 SELENOOQ9BVL4 669 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 SMARCAL1Q9NZC9 954 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
CALD1-222ENST00000495522 FTCDO95954 541 aa16.77■□□□□ 0.28
CALD1-222ENST00000495522 PTGER2P43116 358 aa16.77■□□□□ 0.28
CALD1-222ENST00000495522 HSD17B4P51659 736 aa16.77■□□□□ 0.28
CALD1-222ENST00000495522 HS2ST1Q7LGA3 356 aa16.77■□□□□ 0.28
CALD1-222ENST00000495522 GSPT2Q8IYD1 628 aaKnown RBP16.77■□□□□ 0.28
CALD1-222ENST00000495522 RBM46Q8TBY0 533 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms