RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 MTERF2Q49AM1 385 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 MTHFD1LQ6UB35 978 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 ANO5Q75V66 913 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 CABP7Q86V35 215 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 RETREG2Q8NC44 543 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 RASSF8Q8NHQ8 419 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 CEP170P1Q96L14 293 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 SPATA32Q96LK8 384 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 CSRNP2Q9H175 543 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 HIPK3Q9H422 1215 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 CYP26B1Q9NR63 512 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 WRAP73Q9P2S5 460 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-235ENST00000495515 KIAA1024Q9UPX6 916 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 PCDHA2Q9Y5H9 948 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 CUTAO60888 179 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 CAND2O75155 1236 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 RAG1P15918 1043 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 TMOD1P28289 359 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 CDC25AP30304 524 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 ME1P48163 572 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 HIC1Q14526 733 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 TARBP2Q15633 366 aaKnown RBP19.1■□□□□ 0.65
HDAC6-235ENST00000495515 ZRSR1Q15695 479 aaKnown RBP19.1■□□□□ 0.65
HDAC6-235ENST00000495515 XKR9Q5GH70 373 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 MARCH8Q5T0T0 291 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 POTEGQ6S5H5 508 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 ZNF579Q8NAF0 562 aaKnown RBP19.1■□□□□ 0.65
HDAC6-235ENST00000495515 TRAPPC12Q8WVT3 735 aa19.1■□□□□ 0.65
HDAC6-235ENST00000495515 SMIM35A0A1B0GVV1 85 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 ZBTB42B2RXF5 422 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 PITPNM1O00562 1244 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 RFC5P40937 340 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 GRIN1Q05586 938 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 HYIQ5T013 277 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 PLA2G4FQ68DD2 849 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 SLC7A3Q8WY07 619 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 CLIC6Q96NY7 704 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 CTAGE1Q96RT6 745 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 MMTAG2Q9BU76 263 aaKnown RBP19.09■□□□□ 0.65
HDAC6-235ENST00000495515 NOC4LQ9BVI4 516 aaKnown RBP19.09■□□□□ 0.65
HDAC6-235ENST00000495515 CCSER1Q9C0I3 900 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 DDX19AQ9NUU7 478 aaKnown RBP19.09■□□□□ 0.65
HDAC6-235ENST00000495515 CCDC39Q9UFE4 941 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 DBR1Q9UK59 544 aaKnown RBP19.09■□□□□ 0.65
HDAC6-235ENST00000495515 DNM3Q9UQ16 869 aa19.09■□□□□ 0.65
HDAC6-235ENST00000495515 C22orf31O95567 290 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 TIMP1P01033 207 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 DNM2P50570 870 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 POLGP54098 1239 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-235ENST00000495515 RBL2Q08999 1139 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 SH3RF1Q7Z6J0 888 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 RPAINQ86UA6 219 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 NME8Q8N427 588 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 METTL13Q8N6R0 699 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 PIGOQ8TEQ8 1089 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 LEO1Q8WVC0 666 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-235ENST00000495515 MAP7D2Q96T17 732 aa19.08■□□□□ 0.64
HDAC6-235ENST00000495515 LBHD1Q9BQE6 289 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-235ENST00000495515 ZMYND8Q9ULU4 1186 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-235ENST00000495515 ARHGEF35A5YM69 484 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 TMEM150BA6NC51 233 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 TRIM43BA6NCK2 446 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 GAS2O43903 313 aaKnown RBP19.07■□□□□ 0.64
HDAC6-235ENST00000495515 DGAT1O75907 488 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 THPOP40225 353 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 RARRES1P49788 294 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 NPEPPSP55786 919 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 EFCAB12Q6NXP0 572 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 ZNF710Q8N1W2 664 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 SYMPKQ92797 1274 aaKnown RBP19.07■□□□□ 0.64
HDAC6-235ENST00000495515 TRIM43Q96BQ3 446 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-235ENST00000495515 PPP1R12CQ9BZL4 782 aa19.07■□□□□ 0.64
HDAC6-235ENST00000495515 FAM49AQ9H0Q0 323 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-235ENST00000495515 M0QZ92 97 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 ZBTB39O15060 712 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 MAFO75444 373 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-235ENST00000495515 PARNO95453 639 aaKnown RBP19.06■□□□□ 0.64
HDAC6-235ENST00000495515 EYA4O95677 639 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 SELPP16109 830 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 SYN1P17600 705 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 ECM1Q16610 540 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 CSPP1Q1MSJ5 1256 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 SPECC1Q5M775 1068 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 IER5Q5VY09 327 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 RUFY4Q6ZNE9 571 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 TMEM199Q8N511 208 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 DNAJB3Q8WWF6 145 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 DHX38Q92620 1227 aaKnown RBP19.06■□□□□ 0.64
HDAC6-235ENST00000495515 EPSTI1Q96J88 318 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 SH2D3AQ9BRG2 576 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 SUGCTQ9HAC7 445 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 PCDHA7Q9UN72 937 aa19.06■□□□□ 0.64
HDAC6-235ENST00000495515 MYH9P35579 1960 aaKnown RBP19.06■□□□□ 0.64
HDAC6-235ENST00000495515 CKBP12277 381 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 CYP2C18P33260 490 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 CDC42EP1Q00587 391 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 GRB10Q13322 594 aa19.05■□□□□ 0.64
HDAC6-235ENST00000495515 TRIM71Q2Q1W2 868 aaKnown RBP19.05■□□□□ 0.64
HDAC6-235ENST00000495515 TMEM119Q4V9L6 283 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms