RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 RALGAPA2Q2PPJ7 1873 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.87□□□□□ -0.03
ERCC3-209ENST00000494464 ST3GAL1Q11201 340 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 CUL4AQ13619 759 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 NBR1Q14596 966 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 PPP4R3AQ6IN85 833 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.87□□□□□ -0.03
ERCC3-209ENST00000494464 CKAP2LQ8IYA6 745 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 SPRYD3Q8NCJ5 442 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
ERCC3-209ENST00000494464 OXER1Q8TDS5 423 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 TOP1MTQ969P6 601 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 NAP1L4Q99733 375 aaKnown RBP14.87□□□□□ -0.03
ERCC3-209ENST00000494464 BRMS1Q9HCU9 246 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 DDX25Q9UHL0 483 aaKnown RBP14.87□□□□□ -0.03
ERCC3-209ENST00000494464 INSL6Q9Y581 213 aa14.87□□□□□ -0.03
ERCC3-209ENST00000494464 EVPLQ92817 2033 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 RBAK-RBAKDNI3L0D1 243 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 CHMP2AO43633 222 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 SLC37A4O43826 429 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 ZNF862O60290 1169 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 C22orf31O95567 290 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 OATP04181 439 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 POU3F3P20264 500 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-209ENST00000494464 KLRC1P26715 233 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 KRT2P35908 639 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 PRKCEQ02156 737 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 LETM2Q2VYF4 491 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-209ENST00000494464 TNFRSF25Q93038 417 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 KCNMB3Q9NPA1 279 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 NLRC5Q86WI3 1866 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 MYO9BQ13459 2157 aa14.86□□□□□ -0.03
ERCC3-209ENST00000494464 LINC01553A4QN01 128 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 JAK2O60674 1132 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 DTNBO60941 627 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 MMP1P03956 469 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 FAM117BQ6P1L5 589 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 PIK3AP1Q6ZUJ8 805 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 MIER3Q7Z3K6 550 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 KIAA0319LQ8IZA0 1049 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 GJA10Q969M2 543 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 INTS4Q96HW7 963 aaKnown RBP14.85□□□□□ -0.03
ERCC3-209ENST00000494464 TMX3Q96JJ7 454 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 FAM20AQ96MK3 541 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 FTHL17Q9BXU8 183 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 CELF4Q9BZC1 486 aaKnown RBP14.85□□□□□ -0.03
ERCC3-209ENST00000494464 AGO3Q9H9G7 860 aaKnown RBP14.85□□□□□ -0.03
ERCC3-209ENST00000494464 TTC3P53804 2025 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 EPOPA6NHQ4 379 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 TBX3O15119 743 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 MAGEB2O15479 319 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 IGFBP4P22692 258 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 CD52P31358 61 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 ERVK-21P61565 698 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 TMEM62Q0P6H9 643 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 NR5A1Q13285 461 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 PPP2R5CQ13362 524 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 UGCGQ16739 394 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 LINC01465Q8N7H1 131 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 ARNTL2Q8WYA1 636 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 TGS1Q96RS0 853 aaKnown RBP14.85□□□□□ -0.03
ERCC3-209ENST00000494464 CERS4Q9HA82 394 aa14.85□□□□□ -0.03
ERCC3-209ENST00000494464 GTPBP6O43824 516 aaPredicted RBP14.84□□□□□ -0.03
ERCC3-209ENST00000494464 CCNT1O60563 726 aaKnown RBP14.84□□□□□ -0.03
ERCC3-209ENST00000494464 PAK2Q13177 524 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 TRIM29Q14134 588 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 EARS2Q5JPH6 523 aaKnown RBP14.84□□□□□ -0.03
ERCC3-209ENST00000494464 SPRED2Q7Z698 418 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 LINC01599Q8WXQ3 324 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 SAMD11Q96NU1 681 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 YME1L1Q96TA2 773 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 LLPHQ9BRT6 129 aaKnown RBP14.84□□□□□ -0.03
ERCC3-209ENST00000494464 SH2B1Q9NRF2 756 aaPredicted RBP14.84□□□□□ -0.03
ERCC3-209ENST00000494464 NRBP2Q9NSY0 501 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 VAV3Q9UKW4 847 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 PADI3Q9ULW8 664 aa14.84□□□□□ -0.03
ERCC3-209ENST00000494464 FAM205CA6NFA0 338 aa14.83□□□□□ -0.04
ERCC3-209ENST00000494464 LPXNO60711 386 aa14.83□□□□□ -0.04
ERCC3-209ENST00000494464 KRT40Q6A162 431 aa14.83□□□□□ -0.04
ERCC3-209ENST00000494464 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
ERCC3-209ENST00000494464 DIS3L2Q8IYB7 885 aaKnown RBP14.83□□□□□ -0.04
ERCC3-209ENST00000494464 ZNF710Q8N1W2 664 aa14.83□□□□□ -0.04
ERCC3-209ENST00000494464 ZSCAN31Q96LW9 406 aaPredicted RBP14.83□□□□□ -0.04
ERCC3-209ENST00000494464 MAP7D2Q96T17 732 aa14.83□□□□□ -0.04
ERCC3-209ENST00000494464 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
ERCC3-209ENST00000494464 RC3H2Q9HBD1 1191 aaKnown RBP14.83□□□□□ -0.04
ERCC3-209ENST00000494464 MTCH2Q9Y6C9 303 aa14.83□□□□□ -0.04
ERCC3-209ENST00000494464 REV3LO60673 3130 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 ARID2Q68CP9 1835 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 RFXAPO00287 272 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 ENPP3O14638 875 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 UPP2O95045 317 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 TMOD1P28289 359 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 NUCB2P80303 420 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 HMGN5P82970 282 aaKnown RBP14.82□□□□□ -0.04
ERCC3-209ENST00000494464 GRB10Q13322 594 aa14.82□□□□□ -0.04
ERCC3-209ENST00000494464 TARBP2Q15633 366 aaKnown RBP14.82□□□□□ -0.04
ERCC3-209ENST00000494464 XKR3Q5GH77 459 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms