RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 EXOC1LA0A1B0GW35 172 aa20.58■□□□□ 0.88
COL27A1-207ENST00000494090 HOXA13P31271 388 aaPredicted RBP20.58■□□□□ 0.88
COL27A1-207ENST00000494090 CIITAP33076 1130 aa20.58■□□□□ 0.88
COL27A1-207ENST00000494090 SRRM1Q8IYB3 904 aaKnown RBP20.58■□□□□ 0.88
COL27A1-207ENST00000494090 MSTO1Q9BUK6 570 aa20.58■□□□□ 0.88
COL27A1-207ENST00000494090 LRRC53A6NM62 1247 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 USP17L5A8MUK1 530 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 GRM4Q14833 912 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 SCYL3Q8IZE3 742 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 SRP68Q9UHB9 627 aaKnown RBP20.57■□□□□ 0.88
COL27A1-207ENST00000494090 DNAJC12Q9UKB3 198 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 PLAAQ9Y263 795 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
COL27A1-207ENST00000494090 NUDCD1Q96RS6 583 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 ADRA2BP18089 450 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 ELF1P32519 619 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 BASP1P80723 227 aaKnown RBP20.57■□□□□ 0.88
COL27A1-207ENST00000494090 SMYD2Q9NRG4 433 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 EPS15L1Q9UBC2 864 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 MINPP1Q9UNW1 487 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 ADGRG1Q9Y653 693 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 NRKQ7Z2Y5 1582 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 TNFAIP2Q03169 654 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 SPHKAPQ2M3C7 1700 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 CROCC2H7BZ55 1655 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 LRRD1A4D1F6 860 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 TSTA3Q13630 321 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-207ENST00000494090 NDUFAF2Q8N183 169 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 ISCA1Q9BUE6 129 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 KIF9Q9HAQ2 790 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 TBK1Q9UHD2 729 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 ADAM21Q9UKJ8 722 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 PCDHA6Q9UN73 950 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 PCDHA8Q9Y5H6 950 aa20.57■□□□□ 0.88
COL27A1-207ENST00000494090 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 DYNLT1P63172 113 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 CALN1Q9BXU9 219 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 DCP1AQ9NPI6 582 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-207ENST00000494090 HOXC10Q9NYD6 342 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 RNF17Q9BXT8 1623 aaKnown RBP20.56■□□□□ 0.88
COL27A1-207ENST00000494090 POTEMA6NI47 508 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 LLGL1Q15334 1064 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 ZBTB33Q86T24 672 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 SRGAP2O75044 1071 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 EIF2AK2P19525 551 aaKnown RBP20.56■□□□□ 0.88
COL27A1-207ENST00000494090 RCN2Q14257 317 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 TRIP13Q15645 432 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-207ENST00000494090 Q3C1V9 767 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 FAM133BQ5BKY9 247 aaKnown RBP20.56■□□□□ 0.88
COL27A1-207ENST00000494090 SHC4Q6S5L8 630 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 SEPT12Q8IYM1 358 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 MCUQ8NE86 351 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 ZNF341Q9BYN7 854 aa20.56■□□□□ 0.88
COL27A1-207ENST00000494090 MADDQ8WXG6 1647 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 SYNGAP1Q96PV0 1343 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 PRDX5P30044 214 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 KCNQ4P56696 695 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 DSTYKQ6XUX3 929 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 HEXIM2Q96MH2 286 aaKnown RBP20.55■□□□□ 0.88
COL27A1-207ENST00000494090 NR3C1P04150 777 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 DHX38Q92620 1227 aaKnown RBP20.55■□□□□ 0.88
COL27A1-207ENST00000494090 TBC1D22BQ9NU19 505 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 PIM2Q9P1W9 311 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 FEM1BQ9UK73 627 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 SPATA31A3Q5VYP0 1347 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 IPO5O00410 1097 aaKnown RBP20.55■□□□□ 0.88
COL27A1-207ENST00000494090 HNRNPH2P55795 449 aaKnown RBP20.55■□□□□ 0.88
COL27A1-207ENST00000494090 EXOSC10Q01780 885 aaKnown RBP20.55■□□□□ 0.88
COL27A1-207ENST00000494090 USP27XA6NNY8 438 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 GSG1L2A8MUP6 293 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 MMP10P09238 476 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 FOXO4P98177 505 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 COASYQ13057 564 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 TBC1D9BQ66K14 1250 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 CENPUQ71F23 418 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 TTC25Q96NG3 672 aa20.55■□□□□ 0.88
COL27A1-207ENST00000494090 TOPORSQ9NS56 1045 aaPredicted RBP20.55■□□□□ 0.88
COL27A1-207ENST00000494090 PODNQ7Z5L7 613 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 SFR1Q86XK3 245 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 GOLGA8IPA6NC78 632 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 GOLGA8JA6NMD2 632 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 KIF28PB7ZC32 967 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 ZNF667Q5HYK9 610 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 EFHD1Q9BUP0 239 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 STXBP2Q15833 593 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 FAM20AQ96MK3 541 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 ATP6V0A4Q9HBG4 840 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 BARHL2Q9NY43 387 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 ANKRD20A4Q4UJ75 823 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 ANKRD20A8PQ5CZ79 823 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 ANKRD20A2Q5SQ80 823 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 ANKRD20A1Q5TYW2 823 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 PARD3BQ8TEW8 1205 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
COL27A1-207ENST00000494090 A0A1W2PQC6 194 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 SFI1A8K8P3 1242 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 CATSPER4Q7RTX7 472 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 ERICH1Q86X53 443 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 UBN1Q9NPG3 1134 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 QRICH2Q9H0J4 1663 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms