RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 PNOCQ13519 176 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 ZNF174Q15697 407 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 IL17AQ16552 155 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 ISM2Q6H9L7 571 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 DPP8Q6V1X1 898 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-213ENST00000494016 CCDC186Q7Z3E2 898 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-213ENST00000494016 AOPEPQ8N6M6 819 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 SPC24Q8NBT2 197 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 MRFAP1L1Q96HT8 127 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 EYA3Q99504 573 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 KRTAP4-12Q9BQ66 201 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 TRIM5Q9C035 493 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 CSRNP2Q9H175 543 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 ZNF576Q9H609 170 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-213ENST00000494016 SH3GLB2Q9NR46 395 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 USP40Q9NVE5 1235 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 PCDHA5Q9Y5H7 936 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 SLX4Q8IY92 1834 aa6.83□□□□□ -1.32
CPSF7-213ENST00000494016 A0A087X0B3 334 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 F8W031 263 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 GOLGA6L19H0YKK7 550 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 GIPC1O14908 333 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 POLR2DO15514 142 aaKnown RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 TOP1P11387 765 aaKnown RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 PTGS1P23219 599 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 SMARCA1P28370 1054 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 ARL4DP49703 201 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 NLRP5P59047 1200 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 PCDH1Q08174 1060 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 C19orf57Q0VDD7 668 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 ADGRE1Q14246 886 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 NOLC1Q14978 699 aaKnown RBP eCLIP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 CCDC144BQ3MJ40 725 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 TTC38Q5R3I4 469 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 HGSNATQ68CP4 663 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 STYK1Q6J9G0 422 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 APOBEC3HQ6NTF7 200 aaKnown RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 CDC42EP5Q6NZY7 148 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 NXPE4Q6UWF7 544 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 HHIPL2Q6UWX4 724 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 C2CD5Q86YS7 1000 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 AMOTL1Q8IY63 956 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 CEP57L1Q8IYX8 460 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 C17orf53Q8N3J3 647 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 KIAA1524Q8TCG1 905 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 PIBF1Q8WXW3 757 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 SLC7A3Q8WY07 619 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 EPSTI1Q96J88 318 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 LZTS2Q9BRK4 669 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 MRIQ9BWK5 157 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 NAT10Q9H0A0 1025 aaKnown RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 HSD3B7Q9H2F3 369 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 DDX4Q9NQI0 724 aaKnown RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 SPTLC3Q9NUV7 552 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 KCNK4Q9NYG8 393 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 MAN1B1Q9UKM7 699 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 PYCARDQ9ULZ3 195 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 PCDHA4Q9UN74 947 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 TTF2Q9UNY4 1162 aaKnown RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 CEP131Q9UPN4 1083 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 ZNF646O15015 1829 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-213ENST00000494016 SNED1Q8TER0 1413 aa6.82□□□□□ -1.32
CPSF7-213ENST00000494016 BECN2A8MW95 431 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 GOLGA6L6A8MZA4 724 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 KLRF2D3W0D1 207 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 H0YIN7 160 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 STXBP3O00186 592 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 IKBKBO14920 756 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 GOLGA8HP0CJ92 632 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 XRCC5P13010 732 aaKnown RBP6.81□□□□□ -1.32
CPSF7-213ENST00000494016 TRAPPC10P48553 1259 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 FKBP1AP62942 108 aaKnown RBP6.81□□□□□ -1.32
CPSF7-213ENST00000494016 ATP2C1P98194 919 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-213ENST00000494016 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 MBTPS1Q14703 1052 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 ZNF423Q2M1K9 1284 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-213ENST00000494016 NT5DC1Q5TFE4 455 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 WWC2Q6AWC2 1192 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 PIK3AP1Q6ZUJ8 805 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 ZFPM1Q8IX07 1006 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 BLIDQ8IZY5 108 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 TMEM130Q8N3G9 435 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 DAGLBQ8NCG7 672 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 CNNM3Q8NE01 707 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 SPATA20Q8TB22 786 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 CACTINQ8WUQ7 758 aaKnown RBP6.81□□□□□ -1.32
CPSF7-213ENST00000494016 ZNF622Q969S3 477 aaKnown RBP eCLIP6.81□□□□□ -1.32
CPSF7-213ENST00000494016 FERMT2Q96AC1 680 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 CEP95Q96GE4 821 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 PAGE5Q96GU1 130 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 FRMD6Q96NE9 622 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 OSBPL7Q9BZF2 842 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 CPVLQ9H3G5 476 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 ZNF287Q9HBT7 754 aa6.81□□□□□ -1.32
CPSF7-213ENST00000494016 BRMS1Q9HCU9 246 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms