RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 RUSC1Q9BVN2 902 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 FRMD4BQ9Y2L6 1034 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 ASTN1O14525 1302 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 PDE2AO00408 941 aaPredicted RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 EML1O00423 815 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 ZNF185O15231 689 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 C21orf2O43822 256 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 AKAP3O75969 853 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 ERCC3P19447 782 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 SF3B2Q13435 895 aaKnown RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 RRP1BQ14684 758 aaKnown RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 TCERG1LQ5VWI1 586 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 CCDC174Q6PII3 467 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 IRF2BP2Q7Z5L9 587 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 FAM178BQ8IXR5 827 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 FAM186BQ8IYM0 893 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 SLC17A8Q8NDX2 589 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 ACER1Q8TDN7 264 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 LPAR1Q92633 364 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 SLC35C1Q96A29 364 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 DYDC2Q96IM9 177 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
NPHP3-209ENST00000493732 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 TIPINQ9BVW5 301 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 TLR10Q9BXR5 811 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 RGL1Q9NZL6 768 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 ADAMTS1Q9UHI8 967 aa10.56□□□□□ -0.72
NPHP3-209ENST00000493732 LOXHD1Q8IVV2 1947 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 A0A087X0T9 212 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 A0A0A6YYK5 440 aaPredicted RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 ICAM1P05362 532 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 FAM228BP0C875 321 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 FDX1P10109 184 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 HOXD13P35453 343 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 STAT1P42224 750 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 HSD17B4P51659 736 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 EPHB4P54760 987 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 SNRPFP62306 86 aaKnown RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 GHRHRQ02643 423 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 NNTQ13423 1086 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 CTTNQ14247 550 aaKnown RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 DCAF17Q5H9S7 520 aaPredicted RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 MEI1Q5TIA1 1274 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 ZNF720Q7Z2F6 126 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 LDHDQ86WU2 507 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 SLC9A9Q8IVB4 645 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 IFT20Q8IY31 132 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 SYCE1Q8N0S2 351 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 PRPF38AQ8NAV1 312 aaKnown RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 CYP2W1Q8TAV3 490 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 TMEM174Q8WUU8 243 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 PBKQ96KB5 322 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 DRC1Q96MC2 740 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 UIMC1Q96RL1 719 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 MXRA8Q9BRK3 442 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 TMEM206Q9H813 350 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 CWC15Q9P013 229 aaKnown RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 STIM2Q9P246 746 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 ZHX1Q9UKY1 873 aaPredicted RBP10.55□□□□□ -0.72
NPHP3-209ENST00000493732 KIF13BQ9NQT8 1826 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 CNTNAP1P78357 1384 aa10.55□□□□□ -0.72
NPHP3-209ENST00000493732 CLRN2A0PK11 232 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 ARHGEF35A5YM69 484 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 H3BQF6 201 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 BUB1O43683 1085 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 PALMO75781 387 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 SLC9A1P19634 815 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 NPEPPSP55786 919 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 PDE4CQ08493 712 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 C2orf54Q08AI8 447 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 CETN1Q12798 172 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 C8orf74Q6P047 294 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 NFRKBQ6P4R8 1299 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 B3GNT9Q6UX72 402 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 IWS1Q96ST2 819 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 SELENOOQ9BVL4 669 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 ZCCHC17Q9NP64 241 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 GCNT4Q9P109 453 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 VPS18Q9P253 973 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 LARSQ9P2J5 1176 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 ZNRF3Q9ULT6 936 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 LRRIQ3A6PVS8 624 aaPredicted RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 RSPH10B2B2RC85 870 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 TGFB1I1O43294 461 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 N4BP1O75113 896 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 P4HBP07237 508 aaKnown RBP10.54□□□□□ -0.72
NPHP3-209ENST00000493732 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 RSPH10BP0C881 870 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 LMNB1P20700 586 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 KLRC1P26715 233 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 PTGER2P43116 358 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 JAM2P57087 298 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 TNNC1P63316 161 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 ARID5AQ03989 594 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 PTK2Q05397 1052 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
NPHP3-209ENST00000493732 RPS6KA1Q15418 735 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms