RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 ATAD5Q96QE3 1844 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 DCDC2CA8MYV0 355 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 HMGB1P1B2RPK0 211 aaPredicted RBP15.35■□□□□ 0.05
ZIC4-215ENST00000493664 H0YHG0 523 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
ZIC4-215ENST00000493664 PGRMC1O00264 195 aaKnown RBP15.35■□□□□ 0.05
ZIC4-215ENST00000493664 TTI1O43156 1089 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 MYZAPP0CAP1 466 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 SPATA31C1P0DKV0 1188 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 COPB2P35606 906 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 CACNB3P54284 484 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 SPIRE1Q08AE8 756 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 ZNF844Q08AG5 666 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 USH1GQ495M9 461 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 BANK1Q8NDB2 785 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 CYP2W1Q8TAV3 490 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 OSGEPQ9NPF4 335 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 NR2E1Q9Y466 385 aa15.35■□□□□ 0.05
ZIC4-215ENST00000493664 H0YGN5 161 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 ZBTB48P10074 688 aaPredicted RBP15.34■□□□□ 0.05
ZIC4-215ENST00000493664 IFT88Q13099 833 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 EPHA7Q15375 998 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 GPATCH4Q5T3I0 446 aaKnown RBP15.34■□□□□ 0.05
ZIC4-215ENST00000493664 FRMD5Q7Z6J6 570 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 ACTRT1Q8TDG2 376 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.34■□□□□ 0.05
ZIC4-215ENST00000493664 BHMT2Q9H2M3 363 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 PLCB1Q9NQ66 1216 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 NFS1Q9Y697 457 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 DDX3XO00571 662 aaKnown RBP eCLIP15.34■□□□□ 0.05
ZIC4-215ENST00000493664 GCNT3O95395 438 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 NR3C1P04150 777 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 ARHGAP4P98171 946 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 EP400NLQ6ZTU2 488 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 KSR1Q8IVT5 923 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 PBKQ96KB5 322 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 SIX2Q9NPC8 291 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 DNM3Q9UQ16 869 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 TRAF3IP3Q9Y228 551 aa15.34■□□□□ 0.05
ZIC4-215ENST00000493664 A6NNZ2 444 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 FAM86B1E9PN63 330 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 MEIS2O14770 477 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 FLOT1O75955 427 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 FAM86B2P0C5J1 330 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 ODF2Q5BJF6 829 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 MEX3CQ5U5Q3 659 aaKnown RBP15.33■□□□□ 0.05
ZIC4-215ENST00000493664 SLC35C1Q96A29 364 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 RUSC1Q9BVN2 902 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 RGL1Q9NZL6 768 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 ASTN1O14525 1302 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 BTAF1O14981 1849 aa15.33■□□□□ 0.05
ZIC4-215ENST00000493664 H2AFZP0C0S5 128 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 ABCB4P21439 1286 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 HOXA7P31268 230 aaPredicted RBP15.33■□□□□ 0.04
ZIC4-215ENST00000493664 TCP10Q12799 353 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 H2AFVQ71UI9 128 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 ETNPPLQ8TBG4 499 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 PITPNM2Q9BZ72 1349 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 FNTAP49354 379 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 MNAT1P51948 309 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 PRPF4BQ13523 1007 aaKnown RBP15.33■□□□□ 0.04
ZIC4-215ENST00000493664 CUL1Q13616 776 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 TRIM51Q9BSJ1 452 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 CNOT8Q9UFF9 292 aaKnown RBP15.33■□□□□ 0.04
ZIC4-215ENST00000493664 PCDHAC2Q9Y5I4 1007 aa15.33■□□□□ 0.04
ZIC4-215ENST00000493664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 BTNL10A8MVZ5 291 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 EEF2P13639 858 aaKnown RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 GUCY2CP25092 1073 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 HOXA13P31271 388 aaPredicted RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 GALCP54803 685 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 DOK7Q18PE1 504 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 C10orf76Q5T2E6 689 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 EPM2AIP1Q7L775 607 aaPredicted RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 GLYCTKQ8IVS8 523 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 SYT2Q8N9I0 419 aaPredicted RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 PIGOQ8TEQ8 1089 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 SWAP70Q9UH65 585 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 NOVA2Q9UNW9 492 aaKnown RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 BCS1LQ9Y276 419 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 FOCADQ5VW36 1801 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 ZBTB39O15060 712 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 IFI16Q16666 785 aaKnown RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 ZC2HC1CQ53FD0 456 aaPredicted RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 EMC10Q5UCC4 262 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 FAM43BQ6ZT52 329 aaPredicted RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 NT5DC3Q86UY8 548 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 SLFN12Q8IYM2 578 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 LNX1Q8TBB1 728 aaPredicted RBP15.32■□□□□ 0.04
ZIC4-215ENST00000493664 DNAJC18Q9H819 358 aa15.32■□□□□ 0.04
ZIC4-215ENST00000493664 PDXKO00764 312 aa15.31■□□□□ 0.04
ZIC4-215ENST00000493664 CALUO43852 315 aaPredicted RBP15.31■□□□□ 0.04
ZIC4-215ENST00000493664 FAM107AO95990 144 aa15.31■□□□□ 0.04
ZIC4-215ENST00000493664 FGGP02679 453 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms