RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 GPR42O15529 346 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 DDNO94850 711 aaPredicted RBP5.91□□□□□ -1.46
CLIP4-212ENST00000493551 TGM1P22735 817 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 ZNF165P49910 485 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 PMS1P54277 932 aaKnown RBP5.91□□□□□ -1.46
CLIP4-212ENST00000493551 RBM10P98175 930 aaKnown RBP5.91□□□□□ -1.46
CLIP4-212ENST00000493551 PRR31Q5SQ13 230 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 RCSD1Q6JBY9 416 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 ZNF530Q6P9A1 599 aaPredicted RBP5.91□□□□□ -1.46
CLIP4-212ENST00000493551 C2CD5Q86YS7 1000 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 IFNL2Q8IZJ0 200 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 ZNF622Q969S3 477 aaKnown RBP eCLIP5.91□□□□□ -1.46
CLIP4-212ENST00000493551 FAM161BQ96MY7 647 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 USP42Q9H9J4 1324 aaKnown RBP5.91□□□□□ -1.46
CLIP4-212ENST00000493551 KIF20BQ96Q89 1820 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 ARFGEF1Q9Y6D6 1849 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 ANKRD33BA6NCL7 494 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 MCM4P33991 863 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 FHL2Q14192 279 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 SEZ6Q53EL9 994 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 SPDYAQ5MJ70 313 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 TDRD10Q5VZ19 366 aaKnown RBP5.9□□□□□ -1.46
CLIP4-212ENST00000493551 DCAF15Q66K64 600 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 INTS3Q68E01 1043 aaKnown RBP5.9□□□□□ -1.46
CLIP4-212ENST00000493551 ERMP1Q7Z2K6 904 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 DNAJC10Q8IXB1 793 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 ABHD8Q96I13 439 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 TESK2Q96S53 571 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 ARID3AQ99856 593 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 MTA3Q9BTC8 594 aa5.9□□□□□ -1.46
CLIP4-212ENST00000493551 KDM6AO15550 1401 aaPredicted RBP5.9□□□□□ -1.47
CLIP4-212ENST00000493551 COL5A3P25940 1745 aaPredicted RBP5.89□□□□□ -1.47
CLIP4-212ENST00000493551 FAM86C2PA6NEL3 165 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 SORBS3O60504 671 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 HMGB2P26583 209 aaKnown RBP5.89□□□□□ -1.47
CLIP4-212ENST00000493551 CTCFP49711 727 aaPredicted RBP5.89□□□□□ -1.47
CLIP4-212ENST00000493551 INHBEP58166 350 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 KCNA1Q09470 495 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 EIF4A2Q14240 407 aaKnown RBP5.89□□□□□ -1.47
CLIP4-212ENST00000493551 IGDCC4Q8TDY8 1250 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 TESMINQ9Y4I5 508 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 SBF1O95248 1867 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 TONSLQ96HA7 1378 aa5.89□□□□□ -1.47
CLIP4-212ENST00000493551 MYH14Q7Z406 1995 aaKnown RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 NPHP1O15259 732 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 SERPINB2P05120 415 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 HSPA8P11142 646 aaKnown RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 ITGA4P13612 1032 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 CD247P20963 164 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 CANXP27824 592 aaKnown RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 MTHFSP49914 203 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 EPHB4P54760 987 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 ITGA1P56199 1179 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 SLC39A6Q13433 755 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 ZC3H18Q86VM9 953 aaKnown RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF575Q86XF7 245 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 USP33Q8TEY7 942 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF296Q8WUU4 475 aaPredicted RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF341Q9BYN7 854 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 NOL6Q9H6R4 1146 aaKnown RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 WDR26Q9H7D7 661 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 ABT1Q9ULW3 272 aaKnown RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 WDR33Q9C0J8 1336 aaKnown RBP5.88□□□□□ -1.47
CLIP4-212ENST00000493551 CNTNAP1P78357 1384 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 TJP1Q07157 1748 aa5.88□□□□□ -1.47
CLIP4-212ENST00000493551 PATE3B3GLJ2 98 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 H0YIN7 160 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 CYP1A1P04798 512 aaPredicted RBP5.87□□□□□ -1.47
CLIP4-212ENST00000493551 TM4SF1P30408 202 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 APOBRQ0VD83 1088 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 C1orf141Q5JVX7 400 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 AXDND1Q5T1B0 1012 aaPredicted RBP5.87□□□□□ -1.47
CLIP4-212ENST00000493551 OLFM4Q6UX06 510 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 CD300LDQ6UXZ3 194 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 ARHGEF18Q6ZSZ5 1173 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 MIB1Q86YT6 1006 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 DCP2Q8IU60 420 aaKnown RBP5.87□□□□□ -1.47
CLIP4-212ENST00000493551 ZDHHC15Q96MV8 337 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 MRS2Q9HD23 443 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 UBP1Q9NZI7 540 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
CLIP4-212ENST00000493551 GULP1Q9UBP9 304 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 VTI1BQ9UEU0 232 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 ZBTB1Q9Y2K1 713 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 GTF3C3Q9Y5Q9 886 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 CCDC88AQ3V6T2 1871 aa5.87□□□□□ -1.47
CLIP4-212ENST00000493551 COL15A1P39059 1388 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 SOS1Q07889 1333 aaPredicted RBP5.86□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF541Q9H0D2 1346 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 A0A087WZG4 1122 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 ERVV-2B6SEH9 535 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 AURKAO14965 403 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 PPP1R11O60927 126 aaPredicted RBP5.86□□□□□ -1.47
CLIP4-212ENST00000493551 PPP2CBP62714 309 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 PPP2CAP67775 309 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 PLEKHO1Q53GL0 409 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms