RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 SAMM50Q9Y512 469 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 EYSQ5T1H1 3165 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 C22orf31O95567 290 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 CD52P31358 61 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 ODR4Q5SWX8 454 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 LRCH2Q5VUJ6 765 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 B3GNT9Q6UX72 402 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 RTN4RL1Q86UN2 441 aaPredicted RBP12.98□□□□□ -0.33
LRTM1-202ENST00000493075 CRIPAKQ8N1N5 446 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 MICALL1Q8N3F8 863 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 C17orf80Q9BSJ5 609 aa12.98□□□□□ -0.33
LRTM1-202ENST00000493075 H3BNC9 293 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 CRYBB1P53674 252 aaPredicted RBP12.97□□□□□ -0.33
LRTM1-202ENST00000493075 TMEM62Q0P6H9 643 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 PAK2Q13177 524 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 AAK1Q2M2I8 961 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 EPC2Q52LR7 807 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 KRT40Q6A162 431 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 ZNF689Q96CS4 500 aaPredicted RBP12.97□□□□□ -0.33
LRTM1-202ENST00000493075 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
LRTM1-202ENST00000493075 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
LRTM1-202ENST00000493075 MTUS1Q9ULD2 1270 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 RWDD3Q9Y3V2 267 aa12.97□□□□□ -0.33
LRTM1-202ENST00000493075 DOCK5Q9H7D0 1870 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 CCDC194A0A1B0GVG4 234 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 ZNF862O60290 1169 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 DGKIO75912 1065 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 TDP2O95551 362 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 OATP04181 439 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 RB1P06400 928 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 GCFC2P16383 781 aaKnown RBP12.96□□□□□ -0.33
LRTM1-202ENST00000493075 TMOD1P28289 359 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.33
LRTM1-202ENST00000493075 ME3Q16798 604 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 INF2Q27J81 1249 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 NPAS4Q8IUM7 802 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 FIBCD1Q8N539 461 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 ETNPPLQ8TBG4 499 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 GDPD5Q8WTR4 605 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 LINC01599Q8WXQ3 324 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 FAM20AQ96MK3 541 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.33
LRTM1-202ENST00000493075 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.33
LRTM1-202ENST00000493075 PRUNE2Q8WUY3 3088 aa12.96□□□□□ -0.33
LRTM1-202ENST00000493075 C5orf67F2Z3F1 127 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 TBX3O15119 743 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 GPR182O15218 404 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 GPR32O75388 356 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
LRTM1-202ENST00000493075 BMPR1AP36894 532 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 NEK4P51957 841 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 CDC42EP1Q00587 391 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
LRTM1-202ENST00000493075 PTPROQ16827 1216 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 XKR3Q5GH77 459 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 EFCAB12Q6NXP0 572 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 MIER3Q7Z3K6 550 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 NEK8Q86SG6 692 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 METTL13Q8N6R0 699 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 LINC01465Q8N7H1 131 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 CLP1Q92989 425 aaKnown RBP12.95□□□□□ -0.34
LRTM1-202ENST00000493075 HLA-CQ95604 372 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 MRPL38Q96DV4 380 aaKnown RBP12.95□□□□□ -0.34
LRTM1-202ENST00000493075 NIFKQ9BYG3 293 aaKnown RBP12.95□□□□□ -0.34
LRTM1-202ENST00000493075 TMX1Q9H3N1 280 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 ERVK-5Q9HDB9 667 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 NOC2LQ9Y3T9 749 aaKnown RBP12.95□□□□□ -0.34
LRTM1-202ENST00000493075 COL4A6Q14031 1691 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 GBF1Q92538 1859 aa12.95□□□□□ -0.34
LRTM1-202ENST00000493075 CHMP2AO43633 222 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 SEC24BO95487 1268 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 LINC00271P0C7V0 271 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 BMP1P13497 986 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 PRKCEQ02156 737 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 NFX1Q12986 1120 aaKnown RBP12.94□□□□□ -0.34
LRTM1-202ENST00000493075 GPM6BQ13491 265 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 LETM2Q2VYF4 491 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 GJA10Q969M2 543 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 RGS18Q9NS28 235 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 C1orf112Q9NSG2 853 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 ST3GAL5Q9UNP4 418 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 GINS2Q9Y248 185 aa12.94□□□□□ -0.34
LRTM1-202ENST00000493075 ADGRA3Q8IWK6 1321 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms