RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 CHTF18Q8WVB6 975 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 WFDC12Q8WWY7 111 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 LENG1Q96BZ8 264 aaPredicted RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 TRMT2BQ96GJ1 504 aaKnown RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 DUSP13Q9UII6 198 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 NAIPQ13075 1403 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 DUOX1Q9NRD9 1551 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 ARVCFO00192 962 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 ERC2O15083 957 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 PRKD3O94806 890 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 SLURP2P0DP57 97 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 ID4P47928 161 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 SKOR2Q2VWA4 1001 aaPredicted RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 SHISA2Q6UWI4 295 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 RAVER1Q8IY67 606 aaKnown RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 MIER2Q8N344 545 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 PCDH19Q8TAB3 1148 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 FRS2Q8WU20 508 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 FUBP3Q96I24 572 aaKnown RBP eCLIP3.79□□□□□ -1.8
SNX13-209ENST00000492626 TNIP3Q96KP6 325 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 NAP1L4Q99733 375 aaKnown RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 ZSWIM5Q9P217 1185 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 ERBB4Q15303 1308 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 KRBA1A5PL33 1030 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 VSTM5A8MXK1 200 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 LDHAP00338 332 aaKnown RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 VAV1P15498 845 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 IRF9Q00978 393 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 MAP9Q49MG5 647 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 IFIT1BQ5T764 474 aaKnown RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 NXNQ6DKJ4 435 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 GPAT2Q6NUI2 795 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 RNF111Q6ZNA4 994 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 CLEC10AQ8IUN9 316 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 FBXL6Q8N531 539 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 MYRFLQ96LU7 910 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 OSBPL1AQ9BXW6 950 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 CSRNP2Q9H175 543 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 ACSS2Q9NR19 701 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 PPIP5K1Q6PFW1 1433 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 CREB3O43889 395 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 SCAND1P57086 179 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 LHFPL2Q6ZUX7 228 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 DGKHQ86XP1 1220 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 FAM20CQ8IXL6 584 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 TCP11L2Q8N4U5 519 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 WDR48Q8TAF3 677 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 EZH1Q92800 747 aaPredicted RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 ORAI3Q9BRQ5 295 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 METTL22Q9BUU2 404 aaPredicted RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 FOXP3Q9BZS1 431 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 NMRK2Q9NPI5 230 aa3.79□□□□□ -1.8
SNX13-209ENST00000492626 SAP30BPQ9UHR5 308 aaKnown RBP3.79□□□□□ -1.8
SNX13-209ENST00000492626 KLHL33A6NCF5 533 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 IGF2BP3O00425 579 aaKnown RBP eCLIP3.78□□□□□ -1.8
SNX13-209ENST00000492626 GABRDO14764 452 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 DTNBO60941 627 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 RFPL1O75677 317 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 DGKIO75912 1065 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 DSG1Q02413 1049 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 SKIDA1Q1XH10 827 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 SYCP2LQ5T4T6 812 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 CEP68Q76N32 757 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 CPNE8Q86YQ8 564 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 PAF1Q8N7H5 531 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 LINC00116Q8NCU8 138 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 NPLOC4Q8TAT6 608 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 HSPBAP1Q96EW2 488 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 FCRL3Q96P31 734 aaPredicted RBP3.78□□□□□ -1.8
SNX13-209ENST00000492626 MMP19Q99542 508 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 C14orf119Q9NWQ9 140 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 NRXN2Q9P2S2 1712 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 MAFGO15525 162 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 TSPY4P0CV99 314 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 TSPY10P0CW01 314 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 YBX3P16989 372 aaKnown RBP eCLIP3.78□□□□□ -1.8
SNX13-209ENST00000492626 KIF11P52732 1056 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 PURAQ00577 322 aaKnown RBP3.78□□□□□ -1.8
SNX13-209ENST00000492626 SLC14A2Q15849 920 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 CREG2Q8IUH2 290 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 KREMEN2Q8NCW0 462 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 COPS5Q92905 334 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 ACAP3Q96P50 834 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 HDAC8Q9BY41 377 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 USP25Q9UHP3 1055 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 ABCC11Q96J66 1382 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 UBR3Q6ZT12 1888 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 VEGFAP15692 232 aaPredicted RBP3.78□□□□□ -1.8
SNX13-209ENST00000492626 BCL6P41182 706 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 IARSP41252 1262 aaKnown RBP3.78□□□□□ -1.8
SNX13-209ENST00000492626 TSHZ1Q6ZSZ6 1077 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 WAPLQ7Z5K2 1190 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 E2F7Q96AV8 911 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 SCARF2Q96GP6 870 aaPredicted RBP3.78□□□□□ -1.8
SNX13-209ENST00000492626 FAM46AQ96IP4 442 aaKnown RBP3.78□□□□□ -1.8
SNX13-209ENST00000492626 PTCHD1Q96NR3 888 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 FAM204AQ9H8W3 233 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 STOML1Q9UBI4 398 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 MINPP1Q9UNW1 487 aa3.78□□□□□ -1.8
SNX13-209ENST00000492626 ST20-MTHFSA0A0A6YYL1 179 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms