RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 RAD21O60216 631 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 RHOBTB3O94955 611 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 FTCDO95954 541 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 ITGA6P23229 1130 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 USP11P51784 963 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 ATP2C1P98194 919 aaPredicted RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 POU5F1Q01860 360 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 PLOD1Q02809 727 aaPredicted RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 GCKRQ14397 625 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 PROSER3Q2NL68 480 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 HGSNATQ68CP4 663 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 UNC13DQ70J99 1090 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 TRIM22Q8IYM9 498 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 LRRC8CQ8TDW0 803 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 TAF4BQ92750 862 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 CNOT6LQ96LI5 555 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 MPHOSPH6Q99547 160 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.5□□□□□ -0.73
VPS8-225ENST00000492449 DDX23Q9BUQ8 820 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 EPB41L1Q9H4G0 881 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 AZI2Q9H6S1 392 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 STK32BQ9NY57 414 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 ATRNO75882 1429 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 A0A0J9YVX5 310 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 BICDL2A1A5D9 508 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 TCP11X1B4DZS4 312 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 BIRC5O15392 142 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 HNRNPRO43390 633 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 TPD52L2O43399 206 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 PABPC4LP0CB38 370 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 POTEIP0CG38 1075 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 PIM1P11309 404 aaPredicted RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 RXRAP19793 462 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 CDK7P50613 346 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 RCAN1P53805 252 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 HPCAP84074 193 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 AP1B1Q10567 949 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 GIT2Q14161 759 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 MAP7Q14244 749 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 KLC3Q6P597 504 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 NELFCDQ8IXH7 590 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 CKAP2Q8WWK9 683 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 SCG3Q8WXD2 468 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 MAML3Q96JK9 1138 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 CATSPER2Q96P56 530 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 NOC4LQ9BVI4 516 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 DHX36Q9H2U1 1008 aaKnown RBP10.5□□□□□ -0.73
VPS8-225ENST00000492449 ZDHHC18Q9NUE0 388 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 KLHL14Q9P2G3 628 aa10.5□□□□□ -0.73
VPS8-225ENST00000492449 METP08581 1390 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 PPP1R2P41236 205 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 PMS2P54278 862 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 IFI35P80217 286 aaPredicted RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 GFPT1Q06210 699 aaPredicted RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 TMEM259Q4ZIN3 620 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 RBM26Q5T8P6 1007 aaKnown RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 DENND2CQ68D51 928 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 PDXDC1Q6P996 788 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 ECHDC2Q86YB7 292 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 ANKRD13CQ8N6S4 541 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 USHBP1Q8N6Y0 703 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 PCMTD1Q96MG8 357 aaPredicted RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 NLRP3Q96P20 1036 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 SETDB2Q96T68 719 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 PUS3Q9BZE2 481 aaKnown RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 METTL14Q9HCE5 456 aaKnown RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 NLRC4Q9NPP4 1024 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 RHBDL2Q9NX52 303 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 UTP11Q9Y3A2 253 aaKnown RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 ATP8B3O60423 1300 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 LRRC53A6NM62 1247 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 KLRC4O43908 158 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 LYNP07948 512 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 RASSF2P50749 326 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 YARSP54577 528 aaKnown RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 OXCT1P55809 520 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 GPSM2P81274 684 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 EHHADHQ08426 723 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 RPS6KA1Q15418 735 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 COBLL1Q53SF7 1204 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 SNX30Q5VWJ9 437 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 CGB2Q6NT52 195 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 CSGALNACT2Q8N6G5 542 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 WDR60Q8WVS4 1066 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 APPBP2Q92624 585 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 STAMQ92783 540 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 SLC7A6OSQ96CW6 309 aaPredicted RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 MTA3Q9BTC8 594 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 DENND2DQ9H6A0 471 aaPredicted RBP10.49□□□□□ -0.73
VPS8-225ENST00000492449 TBCCD1Q9NVR7 557 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 ATP8A1Q9Y2Q0 1164 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 NUB1Q9Y5A7 615 aa10.49□□□□□ -0.73
VPS8-225ENST00000492449 ACEP12821 1306 aa10.48□□□□□ -0.73
VPS8-225ENST00000492449 HNRNPCL1O60812 293 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms