RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 GALNT17Q6IS24 598 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 RUFY3Q7L099 469 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 CKAP2LQ8IYA6 745 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 GJD3Q8N144 294 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 BANK1Q8NDB2 785 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 P2RX5Q93086 422 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 ZNF274Q96GC6 653 aaPredicted RBP9.92□□□□□ -0.82
NUP50-217ENST00000491860 PGBD1Q96JS3 809 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 TM6SF1Q9BZW5 370 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 C1orf112Q9NSG2 853 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 TMEM260Q9NX78 707 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 LRFN2Q9ULH4 789 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 TELO2Q9Y4R8 837 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 MAFBQ9Y5Q3 323 aaPredicted RBP9.92□□□□□ -0.82
NUP50-217ENST00000491860 CYP46A1Q9Y6A2 500 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 LOXHD1Q8IVV2 1947 aa9.92□□□□□ -0.82
NUP50-217ENST00000491860 EVPLQ92817 2033 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 FAM86B1E9PN63 330 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 DHX15O43143 795 aaKnown RBP9.91□□□□□ -0.82
NUP50-217ENST00000491860 RPS6KA5O75582 802 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 CDKL5O76039 1030 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 DEXIO95424 95 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 FAM86B2P0C5J1 330 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 ALADP13716 330 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 XBP1P17861 261 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 KLRC1P26715 233 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 CD52P31358 61 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 SFNP31947 248 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 MRE11P49959 708 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 CDC42EP1Q00587 391 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 SSRP1Q08945 709 aaKnown RBP9.91□□□□□ -0.82
NUP50-217ENST00000491860 PKN1Q16512 942 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 SWSAP1Q6NVH7 229 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 SPRED2Q7Z698 418 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 RDM1Q8NG50 284 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 ZNF689Q96CS4 500 aaPredicted RBP9.91□□□□□ -0.82
NUP50-217ENST00000491860 PABPC5Q96DU9 382 aaKnown RBP9.91□□□□□ -0.82
NUP50-217ENST00000491860 RIT2Q99578 217 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 SLC26A6Q9BXS9 759 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 RC3H2Q9HBD1 1191 aaKnown RBP9.91□□□□□ -0.82
NUP50-217ENST00000491860 ZSWIM6Q9HCJ5 1215 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 AAASQ9NRG9 546 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 NRBP2Q9NSY0 501 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 PADI3Q9ULW8 664 aa9.91□□□□□ -0.82
NUP50-217ENST00000491860 DDX39AO00148 427 aaKnown RBP9.9□□□□□ -0.82
NUP50-217ENST00000491860 HOXA2O43364 376 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 CCNE2O96020 404 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 PDIA3P30101 505 aaKnown RBP9.9□□□□□ -0.82
NUP50-217ENST00000491860 SARSP49591 514 aaKnown RBP9.9□□□□□ -0.82
NUP50-217ENST00000491860 JAK3P52333 1124 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 CRYBB1P53674 252 aaPredicted RBP9.9□□□□□ -0.82
NUP50-217ENST00000491860 NLRP5P59047 1200 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 NTRK3Q16288 839 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 PRR16Q569H4 304 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 MOXD1Q6UVY6 613 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 CCDC60Q8IWA6 550 aaPredicted RBP9.9□□□□□ -0.82
NUP50-217ENST00000491860 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.9□□□□□ -0.82
NUP50-217ENST00000491860 RSPH1Q8WYR4 309 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 PHKBQ93100 1093 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 MAP7D2Q96T17 732 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 AGO3Q9H9G7 860 aaKnown RBP9.9□□□□□ -0.82
NUP50-217ENST00000491860 PRKAG3Q9UGI9 489 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 SAMM50Q9Y512 469 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 PCDHB7Q9Y5E2 793 aa9.9□□□□□ -0.82
NUP50-217ENST00000491860 WDR81Q562E7 1941 aa9.9□□□□□ -0.83
NUP50-217ENST00000491860 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 DENND3A2RUS2 1198 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 DKC1O60832 514 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP50-217ENST00000491860 GAS7O60861 476 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 MMP1P03956 469 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 CPA1P15085 419 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 KCNA5P22460 613 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 NHLH1Q02575 133 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 UBE3AQ05086 875 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 NFX1Q12986 1120 aaKnown RBP9.89□□□□□ -0.83
NUP50-217ENST00000491860 COL19A1Q14993 1142 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 PTCRAQ6ISU1 281 aaPredicted RBP9.89□□□□□ -0.83
NUP50-217ENST00000491860 SLC24A5Q71RS6 500 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 SKAP1Q86WV1 359 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 KIAA0319LQ8IZA0 1049 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 CRIPAKQ8N1N5 446 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 NEK9Q8TD19 979 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 TRAPPC12Q8WVT3 735 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 NAP1L4Q99733 375 aaKnown RBP9.89□□□□□ -0.83
NUP50-217ENST00000491860 TEKT3Q9BXF9 490 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 ELAC1Q9H777 363 aaKnown RBP9.89□□□□□ -0.83
NUP50-217ENST00000491860 DISC1Q9NRI5 854 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 GABBR1Q9UBS5 961 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 PCDHA4Q9UN74 947 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 PCDHB12Q9Y5F1 795 aa9.89□□□□□ -0.83
NUP50-217ENST00000491860 C22orf31O95567 290 aa9.88□□□□□ -0.83
NUP50-217ENST00000491860 OATP04181 439 aa9.88□□□□□ -0.83
NUP50-217ENST00000491860 CCT2P78371 535 aaKnown RBP9.88□□□□□ -0.83
NUP50-217ENST00000491860 TMEM62Q0P6H9 643 aa9.88□□□□□ -0.83
NUP50-217ENST00000491860 ANKRD1Q15327 319 aa9.88□□□□□ -0.83
NUP50-217ENST00000491860 Q4G0T1 1027 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms