RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 GDF6Q6KF10 455 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 SLC39A5Q6ZMH5 540 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 NECAB2Q7Z6G3 386 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 UBE2Q1Q7Z7E8 422 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 MRPS27Q92552 414 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 DHX58Q96C10 678 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 CEP170P1Q96L14 293 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 CCDC43Q96MW1 224 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 NACC1Q96RE7 527 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 CEP89Q96ST8 783 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 BHMT2Q9H2M3 363 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 NRBP2Q9NSY0 501 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 BLOC1S4Q9NUP1 217 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 TRMT13Q9NUP7 481 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 GTF2IRD1Q9UHL9 959 aa12.02□□□□□ -0.49
CACNA1C-227ENST00000491104 GOLGA6L4A6NEF3 574 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 POLR2DO15514 142 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 TREHO43280 583 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 B4GALT4O60513 344 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 USO1O60763 962 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 PQBP1O60828 265 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 RARRES1P49788 294 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 NDUFA8P51970 172 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 RTP1P59025 263 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 TARBP2Q15633 366 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 MARCH8Q5T0T0 291 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 RRAGBQ5VZM2 374 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 NFRKBQ6P4R8 1299 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 LRRC71Q8N4P6 559 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 SLC43A3Q8NBI5 491 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 RAD54LQ92698 747 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 NIFKQ9BYG3 293 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 NT5C3AQ9H0P0 336 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 TRPV6Q9H1D0 765 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 CYP26B1Q9NR63 512 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 PCDH10Q9P2E7 1040 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 HPSEQ9Y251 543 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
CACNA1C-227ENST00000491104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
CACNA1C-227ENST00000491104 ARHGEF35A5YM69 484 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 SLC26A4O43511 780 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 C22orf31O95567 290 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 EYA4O95677 639 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 PLA2G4BP0C869 781 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 CAPN2P17655 700 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 LIG1P18858 919 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 MUTP22033 750 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 KLRC1P26715 233 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 HOXC8P31273 242 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 STAT6P42226 847 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 CDK7P50613 346 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 ADAM17P78536 824 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 SNX17Q15036 470 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 E2F4Q16254 413 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 ZNF484Q5JVG2 852 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 PADI6Q6TGC4 694 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 MAEAQ7L5Y9 396 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 SESTD1Q86VW0 696 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 FAM126BQ8IXS8 530 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 LARP4BQ92615 738 aaKnown RBP12□□□□□ -0.49
CACNA1C-227ENST00000491104 STAMQ92783 540 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 WNT8BQ93098 351 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 CTAGE1Q96RT6 745 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 RUSC1Q9BVN2 902 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 POLD4Q9HCU8 107 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 ANKEF1Q9NU02 776 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 LMBRD1Q9NUN5 540 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 SERTAD1Q9UHV2 236 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 TUBE1Q9UJT0 475 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 DBR1Q9UK59 544 aaKnown RBP12□□□□□ -0.49
CACNA1C-227ENST00000491104 DNM3Q9UQ16 869 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 NRCAMQ92823 1304 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 COL1A2P08123 1366 aa12□□□□□ -0.49
CACNA1C-227ENST00000491104 MYH11P35749 1972 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 NPHP3-ACAD11A0A0J9YXS1 232 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 FAM237AA0A1B0GTK4 181 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 CAPN15O75808 1086 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 CYP2C9P11712 490 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 SYKP43405 635 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 CLCN3P51790 818 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 POLGP54098 1239 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 SLC12A3P55017 1021 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 TLE2Q04725 743 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 PTPN11Q06124 597 aaPredicted RBP11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 RAD51AP2Q09MP3 1159 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 TBC1D8BQ0IIM8 1120 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 DRP2Q13474 957 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 EMC2Q15006 297 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 PTGISQ16647 500 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 MTHFD1LQ6UB35 978 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 CCDC73Q6ZRK6 1079 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 GRAMD1CQ8IYS0 662 aa11.99□□□□□ -0.49
CACNA1C-227ENST00000491104 PPP1R16BQ96T49 567 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms