RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SBK1Q52WX2 424 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 C10orf76Q5T2E6 689 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 CCDC26Q8TAB7 109 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 DDX12PQ92771 950 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 SLC24A3Q9HC58 644 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 ATP2B4P23634 1241 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 HOXA7P31268 230 aaPredicted RBP21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 TCP11Q8WWU5 503 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 RAD54LQ92698 747 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 KANSL2Q9H9L4 492 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 FAM114A2Q9NRY5 505 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 RIPK1Q13546 671 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 ZNF804AQ7Z570 1209 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 SP8Q8IXZ3 490 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 NSMCE1Q8WV22 266 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 GANQ9H2C0 597 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 DPH5Q9H2P9 285 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 ZNF219Q9P2Y4 722 aaPredicted RBP21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 KIAA1551Q9HCM1 1747 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 ASAP2O43150 1006 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 CAND2O75155 1236 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 PTK2Q05397 1052 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 MYO1EQ12965 1108 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 ITIH4Q14624 930 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 C15orf52Q6ZUT6 534 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 CELF4Q9BZC1 486 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 ATP8A1Q9Y2Q0 1164 aa21.06■□□□□ 0.96
SNAPC3-206ENST00000490969 LRRC37AA6NMS7 1700 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 SMCO2A6NFE2 343 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 PPFIA2O75334 1257 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 MMEP08473 750 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 CLTAP09496 248 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 CHN1P15882 459 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 NPR1P16066 1061 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 CHADLQ6NUI6 762 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 HOOK3Q86VS8 718 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 TRIM59Q8IWR1 403 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 RASGEF1CQ8N431 466 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 TBCKQ8TEA7 893 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 UTP11Q9Y3A2 253 aaKnown RBP21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 ZNF571Q7Z3V5 609 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 PIGWQ7Z7B1 504 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 PNMA8AQ86V59 439 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 TPCN2Q8NHX9 752 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 CEP63Q96MT8 703 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 C6orf50Q9HD87 102 aa21.05■□□□□ 0.96
SNAPC3-206ENST00000490969 PEX26Q7Z412 305 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 DNAAF5Q86Y56 855 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 TXLNGYQ9BZA5 131 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 SPDYCQ5MJ68 293 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 DZIP1Q86YF9 867 aaKnown RBP21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 ATXN2LQ8WWM7 1075 aaKnown RBP21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 MTMR9Q96QG7 549 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 FMO2Q99518 471 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 MXD3Q9BW11 206 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 MCM9Q9NXL9 1143 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 STK32BQ9NY57 414 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 C15orf41Q9Y2V0 281 aa21.04■□□□□ 0.96
SNAPC3-206ENST00000490969 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 CFAP73A6NFT4 308 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 GNA14O95837 355 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 LDHBP07195 334 aaKnown RBP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 GOLGA8HP0CJ92 632 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 IL1R1P14778 569 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 GNA11P29992 359 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 SF3A3Q12874 501 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 COASYQ13057 564 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 CALCRLQ16602 461 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 NAIF1Q69YI7 327 aaPredicted RBP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 KCNK18Q7Z418 384 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 IRF2BP2Q7Z5L9 587 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 TBC1D1Q86TI0 1168 aaPredicted RBP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 CCHCR1Q8TD31 782 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 THOC1Q96FV9 657 aaKnown RBP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 SELENOSQ9BQE4 189 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 LRRC27Q9C0I9 530 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 BATF3Q9NR55 127 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 NAGPAQ9UK23 515 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 USP17L3A6NCW0 530 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 USP17L4A6NCW7 530 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 USP17L8P0C7I0 530 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 PDE6BP35913 854 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 FXR2P51116 673 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 ORC2Q13416 577 aaPredicted RBP21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 USP17L1Q7RTZ2 530 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 TRIM31Q9BZY9 425 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 CPVLQ9H3G5 476 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 ATAD5Q96QE3 1844 aa21.03■□□□□ 0.96
SNAPC3-206ENST00000490969 SLX4Q8IY92 1834 aa21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 MMP13P45452 471 aa21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 MARSP56192 900 aaKnown RBP21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 DOK7Q18PE1 504 aa21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 TMEM266Q2M3C6 531 aa21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 LRRC34Q8IZ02 419 aa21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 WDR66Q8TBY9 1149 aa21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 ATP8B4Q8TF62 1192 aa21.02■□□□□ 0.96
SNAPC3-206ENST00000490969 NUDT12Q9BQG2 462 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms