RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 DDX41Q9UJV9 622 aaKnown RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 PCDHA1Q9Y5I3 950 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 MAFBQ9Y5Q3 323 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 LCTP09848 1927 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 PNMA6FA0A0J9YX94 578 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 ADAMTS3O15072 1205 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 ATP9BO43861 1147 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 GADD45BO75293 160 aaPredicted RBP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 GH1P01241 217 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 SKIP12755 728 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 HOXA13P31271 388 aaPredicted RBP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 KRT2P35908 639 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 HSD17B4P51659 736 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 NLRP5P59047 1200 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 ARHGAP1Q07960 439 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 NFRKBQ6P4R8 1299 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 DEFB128Q7Z7B8 93 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 VSIG10LQ86VR7 867 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 NOSTRINQ8IVI9 506 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 DAGLBQ8NCG7 672 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 LEO1Q8WVC0 666 aaPredicted RBP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 KAT2BQ92831 832 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 USP28Q96RU2 1077 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 FTOQ9C0B1 505 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 SCAND2PQ9GZW5 306 aaPredicted RBP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 MTIF3Q9H2K0 278 aaKnown RBP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 PXMP2Q9NR77 195 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 MAP3K20Q9NYL2 800 aaKnown RBP8.58□□□□□ -1.04
CLDN1-202ENST00000490800 MSRAQ9UJ68 235 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 CDH23Q9H251 3354 aa8.58□□□□□ -1.04
CLDN1-202ENST00000490800 GCOM1H8Y6P7 765 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 hCG_1984214I3L0E3 225 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 SORBS3O60504 671 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 RGS20O76081 388 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 MMP3P08254 477 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 IQCF3P0C7M6 154 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 POLR2MP0CAP2 368 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 NASPP49321 788 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 TOB1P50616 345 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 RABGGTBP53611 331 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 NAPAP54920 295 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 GHRHRQ02643 423 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 PTPN11Q06124 597 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 LAMC2Q13753 1193 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 PTGISQ16647 500 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 EARS2Q5JPH6 523 aaKnown RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 GALNT17Q6IS24 598 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 DHX37Q8IY37 1157 aaKnown RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 ZNF713Q8N859 430 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 RETREG2Q8NC44 543 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 CCDC148Q8NFR7 591 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 FAM174AQ8TBP5 190 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 GPT2Q8TD30 523 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 PDCD2LQ9BRP1 358 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 ANP32EQ9BTT0 268 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 COL25A1Q9BXS0 654 aaPredicted RBP8.57□□□□□ -1.04
CLDN1-202ENST00000490800 ZMYND12Q9H0C1 365 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 NKX2-4Q9H2Z4 354 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 PRDM12Q9H4Q4 367 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 BRMS1Q9HCU9 246 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 RTEL1Q9NZ71 1219 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 RCOR1Q9UKL0 485 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 CFAP45Q9UL16 551 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 PCDHA4Q9UN74 947 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 NOD1Q9Y239 953 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 CLIC4Q9Y696 253 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 MRVI1Q9Y6F6 885 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 SLC4A7Q9Y6M7 1214 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 UNC80Q8N2C7 3258 aa8.57□□□□□ -1.04
CLDN1-202ENST00000490800 EYSQ5T1H1 3165 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 ESYT2A0FGR8 921 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 SMCO2A6NFE2 343 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 M0R2N6 131 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 MYOGP15173 224 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 SP2Q02086 613 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 CEBPZQ03701 1054 aaKnown RBP8.56□□□□□ -1.04
CLDN1-202ENST00000490800 TRAF1Q13077 416 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 BFSP2Q13515 415 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 PGM5Q15124 567 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 RAB30Q15771 203 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 DGKDQ16760 1214 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 SKOR2Q2VWA4 1001 aaPredicted RBP8.56□□□□□ -1.04
CLDN1-202ENST00000490800 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
CLDN1-202ENST00000490800 BLIDQ8IZY5 108 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 SAMD3Q8N6K7 520 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 LINC00301Q8NCQ3 95 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 IL31RAQ8NI17 732 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 CCDC12Q8WUD4 166 aaPredicted RBP8.56□□□□□ -1.04
CLDN1-202ENST00000490800 PPM1EQ8WY54 764 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 CTAGE1Q96RT6 745 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 SLC28A3Q9HAS3 691 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 HDAC6Q9UBN7 1215 aa8.56□□□□□ -1.04
CLDN1-202ENST00000490800 YBX2Q9Y2T7 364 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms