RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KCNT2Q6UVM3 1135 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 LRRC55Q6ZSA7 311 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 MFSD6Q6ZSS7 791 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 DGKHQ86XP1 1220 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 TBC1D10CQ8IV04 446 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 ACSF2Q96CM8 615 aaPredicted RBP15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 ADAM2Q99965 735 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 CELF4Q9BZC1 486 aaKnown RBP15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 NCDNQ9UBB6 729 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 DDX19BQ9UMR2 479 aa15.83■□□□□ 0.12
EXOSC3-207ENST00000490516 BAZ2BQ9UIF8 2168 aaKnown RBP15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 TRIM6-TRIM34B2RNG4 842 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 GCOM1H8Y6P7 765 aaPredicted RBP15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 PARP1P09874 1014 aaKnown RBP15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 POLR2MP0CAP2 368 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 EPCAMP16422 314 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 SDHBP21912 280 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 CA8P35219 290 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 KRT17Q04695 432 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 TBC1D8BQ0IIM8 1120 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 TMC5Q6UXY8 1006 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 STAG2Q8N3U4 1231 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 TBC1D17Q9HA65 648 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 ERAP1Q9NZ08 941 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 CDV3Q9UKY7 258 aaKnown RBP15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 CA14Q9ULX7 337 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 NEDD4P46934 1319 aa15.82■□□□□ 0.12
EXOSC3-207ENST00000490516 GSTTP1A0A1W2PQM5 241 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 DENND3A2RUS2 1198 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 POTEMA6NI47 508 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 C9IYK1 514 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 INSRRP14616 1297 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 VARS2Q5ST30 1063 aaKnown RBP15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 POTEGQ6S5H5 508 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 SLC24A5Q71RS6 500 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 C1orf210Q8IVY1 113 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 SAMD3Q8N6K7 520 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 TRAPPC12Q8WVT3 735 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 GLG1Q92896 1179 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 ZNF558Q96NG5 402 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 RGS18Q9NS28 235 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 DLGAP2Q9P1A6 1054 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 WNT16Q9UBV4 365 aa15.81■□□□□ 0.12
EXOSC3-207ENST00000490516 EVPLQ92817 2033 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 MIA3Q5JRA6 1907 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 FRMPD4Q14CM0 1322 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 ZBTB5O15062 677 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 KINO60870 393 aaKnown RBP15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 STAM2O75886 525 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 RPLP2P05387 115 aaKnown RBP15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 OTOP3Q7RTS5 596 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 RSAD2Q8WXG1 361 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 SENP7Q9BQF6 1050 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 ATP6V0A4Q9HBG4 840 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 C1orf112Q9NSG2 853 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 DZANK1Q9NVP4 752 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 SPG21Q9NZD8 308 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 NOC2LQ9Y3T9 749 aaKnown RBP15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 FAM208BQ5VWN6 2430 aa15.8■□□□□ 0.12
EXOSC3-207ENST00000490516 TTC41PQ6P2S7 1318 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 KDM3AQ9Y4C1 1321 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 RRN3P2A6NIE6 340 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 HOXB3P14651 431 aaPredicted RBP15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 PPM1AP35813 382 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 KRT76Q01546 638 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 CCDC149Q6ZUS6 474 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 MAML2Q8IZL2 1156 aaPredicted RBP15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 OTUD7AQ8TE49 926 aaPredicted RBP15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 SEPT1Q8WYJ6 367 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 ESR2Q92731 530 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 MTMR8Q96EF0 704 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 CASD1Q96PB1 797 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 RTKNQ9BST9 563 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 CDHR5Q9HBB8 845 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 TMEM161AQ9NX61 479 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 GINS2Q9Y248 185 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 SIT1Q9Y3P8 196 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 PATJQ8NI35 1801 aa15.79■□□□□ 0.12
EXOSC3-207ENST00000490516 PRR5-ARHGAP8B1AHC4 643 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 ATP9AO75110 1047 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 RPS6KA5O75582 802 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 CXCL14O95715 111 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 ARHGAP8P85298 464 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 HOMER1Q86YM7 354 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 TMEM40Q8WWA1 233 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 TMEM117Q9H0C3 514 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 RNF19AQ9NV58 838 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 IGSF9Q9P2J2 1179 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 PCDHA2Q9Y5H9 948 aa15.78■□□□□ 0.12
EXOSC3-207ENST00000490516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 KLRF2D3W0D1 207 aa15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 N4BP1O75113 896 aaKnown RBP15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 PCP11498 1178 aaKnown RBP15.77■□□□□ 0.12
EXOSC3-207ENST00000490516 MS4A1P11836 297 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms