RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 LRRC37BQ96QE4 947 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 BOCQ9BWV1 1114 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 SEMA4AQ9H3S1 761 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 DEF6Q9H4E7 631 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 TCAF1Q9Y4C2 921 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 B4E1Z4 1266 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 HIP1RO75146 1068 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 HMGCRP04035 888 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 ADCY8P40145 1251 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 IRF9Q00978 393 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 CD83Q01151 205 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 ARHGAP44Q17R89 818 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 ZCCHC8Q6NZY4 707 aaKnown RBP5.78□□□□□ -1.48
HMGN1-218ENST00000490032 CC2D1AQ6P1N0 951 aaPredicted RBP5.78□□□□□ -1.48
HMGN1-218ENST00000490032 ZNF585AQ6P3V2 769 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 LARP4Q71RC2 724 aaKnown RBP eCLIP5.78□□□□□ -1.481e-8■■■■■ 31.7
HMGN1-218ENST00000490032 TAX1BP1Q86VP1 789 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 MSL2Q9HCI7 577 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 TESMINQ9Y4I5 508 aa5.78□□□□□ -1.48
HMGN1-218ENST00000490032 A0A0G2JNJ9 132 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 PRAMEF22A3QJZ6 481 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 MATN2O00339 956 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 ARHGAP6O43182 974 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 ASLP04424 464 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 IGFALSP35858 605 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 KCNQ1P51787 676 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 RRADP55042 308 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 DUSP8Q13202 625 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 MOGSQ13724 837 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 TMEM132BQ14DG7 1078 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 TBR1Q16650 682 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 DDX53Q86TM3 631 aaKnown RBP5.77□□□□□ -1.49
HMGN1-218ENST00000490032 HIPK4Q8NE63 616 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 FOXRED1Q96CU9 486 aaPredicted RBP5.77□□□□□ -1.49
HMGN1-218ENST00000490032 MRFAP1L1Q96HT8 127 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 TMPRSS5Q9H3S3 457 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 Q9UFV3 132 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 OAZ3Q9UMX2 235 aa5.77□□□□□ -1.49
HMGN1-218ENST00000490032 ZFR2Q9UPR6 939 aaKnown RBP5.77□□□□□ -1.49
HMGN1-218ENST00000490032 M0R2C6 588 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 MUSKO15146 869 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 DNAJC8O75937 253 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-218ENST00000490032 GLRX3O76003 335 aaKnown RBP5.76□□□□□ -1.49
HMGN1-218ENST00000490032 CR2P20023 1033 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 FNTBP49356 437 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 ALDH6A1Q02252 535 aaKnown RBP5.76□□□□□ -1.49
HMGN1-218ENST00000490032 PCOLCEQ15113 449 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 AGBL4Q5VU57 503 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 GRAMD4Q6IC98 578 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 OTOP2Q7RTS6 562 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 SPRED1Q7Z699 444 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 RTN4RL1Q86UN2 441 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-218ENST00000490032 GIMAP8Q8ND71 665 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-218ENST00000490032 WDR48Q8TAF3 677 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 CALML6Q8TD86 181 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 SH3RF3Q8TEJ3 882 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-218ENST00000490032 SH3TC2Q8TF17 1288 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 CFHR4Q92496 578 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 FOXB1Q99853 325 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 KIAA1683Q9H0B3 1180 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 KANSL2Q9H9L4 492 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 TMEM260Q9NX78 707 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 SAMD15Q9P1V8 674 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 CDC42EP3Q9UKI2 254 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 NR2E1Q9Y466 385 aa5.76□□□□□ -1.49
HMGN1-218ENST00000490032 RFPL3O75679 317 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 RAD17O75943 681 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 APEX1P27695 318 aaKnown RBP5.75□□□□□ -1.49
HMGN1-218ENST00000490032 ZXDAP98168 799 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 NOLC1Q14978 699 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGN1-218ENST00000490032 HS1BP3Q53T59 392 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 USP30Q70CQ3 517 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 FUKQ8N0W3 1084 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 BCL6BQ8N143 479 aaPredicted RBP5.75□□□□□ -1.49
HMGN1-218ENST00000490032 CHST14Q8NCH0 376 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 UBXN4Q92575 508 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 DRC1Q96MC2 740 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 OR10A2Q9H208 303 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 ZSWIM4Q9H7M6 989 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 SLC30A1Q9Y6M5 507 aa5.75□□□□□ -1.49
HMGN1-218ENST00000490032 TRAF5O00463 557 aa5.74□□□□□ -1.49
HMGN1-218ENST00000490032 DVL2O14641 736 aa5.74□□□□□ -1.49
HMGN1-218ENST00000490032 MRE11P49959 708 aa5.74□□□□□ -1.49
HMGN1-218ENST00000490032 CCDC144BQ3MJ40 725 aa5.74□□□□□ -1.49
HMGN1-218ENST00000490032 PALM2Q8IXS6 379 aa5.74□□□□□ -1.49
HMGN1-218ENST00000490032 EDAQ92838 391 aa5.74□□□□□ -1.49
HMGN1-218ENST00000490032 DPYSL5Q9BPU6 564 aa5.74□□□□□ -1.49
HMGN1-218ENST00000490032 TNPO3Q9Y5L0 923 aaKnown RBP5.74□□□□□ -1.49
HMGN1-218ENST00000490032 PMS2P1A4D2B8 440 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 OPA1O60313 960 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 COMTP21964 271 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 MEOX1P50221 254 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 KIF11P52732 1056 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 HGFACQ04756 655 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 ZNF460Q14592 562 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 SPDYAQ5MJ70 313 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 Q6ZSN1 163 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 POLNQ7Z5Q5 900 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 FILIP1Q7Z7B0 1213 aa5.73□□□□□ -1.49
HMGN1-218ENST00000490032 RTKN2Q8IZC4 609 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms