RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 NCAPH2Q6IBW4 605 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 PDXDC2PQ6P474 469 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 B3GNT9Q6UX72 402 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 FAM167BQ9BTA0 163 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 MMTAG2Q9BU76 263 aaKnown RBP10.76□□□□□ -0.69
NOD1-208ENST00000489614 PAPOLBQ9NRJ5 636 aaKnown RBP10.76□□□□□ -0.69
NOD1-208ENST00000489614 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 ZSWIM8A7E2V4 1837 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 SLC26A4O43511 780 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 MAGEA8P43361 318 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 SEC24CP53992 1094 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 TMEM62Q0P6H9 643 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 HYIQ5T013 277 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 KCTD16Q68DU8 428 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 LDHDQ86WU2 507 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 MAB21L3Q8N8X9 362 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 ANO3Q9BYT9 981 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 CCSER1Q9C0I3 900 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 CCDC194A0A1B0GVG4 234 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 GOLGA6BA6NDN3 693 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 AGPSO00116 658 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 CXCL11O14625 94 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 GNAT1P11488 350 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 ZBED6P86452 979 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 ANKRD13AQ8IZ07 590 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 RASSF8Q8NHQ8 419 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 PLEKHG4BQ96PX9 1271 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 RGL1Q9NZL6 768 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 COL20A1Q9P218 1284 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 PNMA2Q9UL42 364 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 L3MBTL1Q9Y468 752 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 ZHX2Q9Y6X8 837 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 SPDYE16A6NNV3 312 aaPredicted RBP10.75□□□□□ -0.69
NOD1-208ENST00000489614 SMIM24O75264 130 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 FOSP01100 380 aaPredicted RBP10.75□□□□□ -0.69
NOD1-208ENST00000489614 NEFHP12036 1026 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 FKBP1BP68106 108 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 NAALADL2Q58DX5 795 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 MICALCLQ6ZW33 695 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 ERO1BQ86YB8 467 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 CLMNQ96JQ2 1002 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 HOMER3Q9NSC5 361 aa10.75□□□□□ -0.69
NOD1-208ENST00000489614 GOLGA6L7A0A1B0GV03 622 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L15C9J2P7 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L13C9JLJ4 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L11C9JVI0 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L18D6R9N7 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L22D6RA61 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L17D6RBQ6 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L19D6RCP7 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L20D6RJB6 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 ZSCAN9O15535 394 aaPredicted RBP10.74□□□□□ -0.69
NOD1-208ENST00000489614 TDP2O95551 362 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 ITGBL1O95965 494 aaPredicted RBP10.74□□□□□ -0.69
NOD1-208ENST00000489614 SLC8A1P32418 973 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 IREB2P48200 963 aaKnown RBP10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L24Q0WX57 530 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 DBN1Q16643 649 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 TREML2Q5T2D2 321 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 USP17L6PQ6QN14 398 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 COG1Q8WTW3 980 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 MTRQ99707 1265 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 NAP1L4Q99733 375 aaKnown RBP10.74□□□□□ -0.69
NOD1-208ENST00000489614 TRIM4Q9C037 500 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 PCNTO95613 3336 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 RBM47A0AV96 593 aaKnown RBP10.74□□□□□ -0.69
NOD1-208ENST00000489614 GOLGA6L9A6NEM1 432 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 TBX3O15119 743 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 KIF5CO60282 957 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 MYL1P05976 194 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 OR52Z1P0C646 297 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 SPRED3Q2MJR0 410 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 LONRF3Q496Y0 759 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 FILIP1LQ4L180 1135 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 CNNM4Q6P4Q7 775 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 TRIM42Q8IWZ5 723 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 SH2D3CQ8N5H7 860 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 SYMPKQ92797 1274 aaKnown RBP10.74□□□□□ -0.69
NOD1-208ENST00000489614 AK8Q96MA6 479 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 BATF3Q9NR55 127 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 HOOK1Q9UJC3 728 aaKnown RBP10.74□□□□□ -0.69
NOD1-208ENST00000489614 KCNH3Q9ULD8 1083 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
NOD1-208ENST00000489614 CAPN15O75808 1086 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 MCM7P33993 719 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 HMGCS2P54868 508 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 GUCY1A3Q02108 690 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 TMEM132BQ14DG7 1078 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 ZYXQ15942 572 aaKnown RBP10.73□□□□□ -0.69
NOD1-208ENST00000489614 SPECC1Q5M775 1068 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 NAA35Q5VZE5 725 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 CCDC121Q6ZUS5 278 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 FAM81AQ8TBF8 368 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
NOD1-208ENST00000489614 MRPL11Q9Y3B7 192 aaKnown RBP10.73□□□□□ -0.69
NOD1-208ENST00000489614 PES1O00541 588 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms