RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 MYOCDQ8IZQ8 938 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 CSGALNACT2Q8N6G5 542 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 SYT2Q8N9I0 419 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PROCA1Q8NCQ7 364 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 CHST13Q8NET6 341 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 NSUN6Q8TEA1 469 aaKnown RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 SLC5A5Q92911 643 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 GPRASP2Q96D09 838 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 HHIPL1Q96JK4 782 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 CCDC43Q96MW1 224 aaKnown RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 WRNIP1Q96S55 665 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 NUP88Q99567 741 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 MXRA8Q9BRK3 442 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 ZNF577Q9BSK1 485 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 TUBB2BQ9BVA1 445 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 TEX13BQ9BXU2 312 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 METTL14Q9HCE5 456 aaKnown RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 RNF186Q9NXI6 227 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 ADD3Q9UEY8 706 aaKnown RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 ODF2LQ9ULJ1 636 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 CTNND2Q9UQB3 1225 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PFASO15067 1338 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 FRMPD4Q14CM0 1322 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 RPTORQ8N122 1335 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 SIPA1L1O43166 1804 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 LGALS16A8MUM7 142 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 H0YCG3 227 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 IPO5O00410 1097 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 VWA5AO00534 786 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 EIF3DO15371 548 aaKnown RBP eCLIP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 MSH4O15457 936 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 CALUO43852 315 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 LYPLA2O95372 231 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 P4HBP07237 508 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 MAPTP10636 758 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 CCND2P30279 289 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 CDC25AP30304 524 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 CTHP32929 405 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 ZNF157P51786 506 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 SH3BP2P78314 561 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 SPP2Q13103 211 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 MYBPC2Q14324 1141 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 RRP1BQ14684 758 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 PTPN14Q15678 1187 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 CCDC174Q6PII3 467 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 KCNV1Q6PIU1 500 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 RNF207Q6ZRF8 634 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 FASTKD5Q7L8L6 764 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 GPBP1Q86WP2 473 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 EXOC8Q8IYI6 725 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 ANKRD13AQ8IZ07 590 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 DNERQ8NFT8 737 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 KIF18AQ8NI77 898 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 CACTINQ8WUQ7 758 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 VTI1AQ96AJ9 217 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 CLMNQ96JQ2 1002 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 PNMA5Q96PV4 448 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 BAG1Q99933 345 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 SRRTQ9BXP5 876 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 MCOLN1Q9GZU1 580 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 HSD3B7Q9H2F3 369 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 BLZF1Q9H2G9 400 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 RPAP3Q9H6T3 665 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 ZSWIM4Q9H7M6 989 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 LUC7LQ9NQ29 371 aaKnown RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 RRAGDQ9NQL2 400 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-208ENST00000489537 OLFML3Q9NRN5 406 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 BLOC1S4Q9NUP1 217 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 PANK4Q9NVE7 773 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 ADAMTS5Q9UNA0 930 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 KIAA1024Q9UPX6 916 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 PPME1Q9Y570 386 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 ZHX2Q9Y6X8 837 aa7.04□□□□□ -1.28
SF3A3-208ENST00000489537 BAZ2BQ9UIF8 2168 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 IGLV3-22A0A075B6J6 115 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 A0A1W2PQJ5 194 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 FRMD3A2A2Y4 597 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 PP2D1A8MPX8 630 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 PDXKO00764 312 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 CETN3O15182 167 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 TRPA1O75762 1119 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 PSMD10O75832 226 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 WFS1O76024 890 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 SLC25A27O95847 323 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 ALAS1P13196 640 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 ATP1A3P13637 1013 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 VARSP26640 1264 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 MTIF2P46199 727 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 COPB1P53618 953 aaKnown RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 FKBP1BP68106 108 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 UBXN1Q04323 297 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 SPIRE1Q08AE8 756 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 TBX2Q13207 712 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 MTMR1Q13613 665 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 PRKG1Q13976 671 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 MCM6Q14566 821 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 NFIL3Q16649 462 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 MAN2A1Q16706 1144 aa7.03□□□□□ -1.28
SF3A3-208ENST00000489537 HERC4Q5GLZ8 1057 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-208ENST00000489537 NBPF12Q5TAG4 269 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms