RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	KCNG1	Q9UIX4	513 aa		11.95	□□□□□ -0.5
ITSN1-231	ENST00000489261	ZNF214	Q9UL59	606 aa	Predicted RBP	11.95	□□□□□ -0.5
ITSN1-231	ENST00000489261	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.95	□□□□□ -0.5
ITSN1-231	ENST00000489261	NFASC	O94856	1347 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	UNCX	A6NJT0	531 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	WDR64	B1ANS9	1081 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	KIF5C	O60282	957 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	IPO7	O95373	1038 aa	Known RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	SLU7	O95391	586 aa	Known RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	NR3C2	P08235	984 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	MYCL	P12524	364 aa	Predicted RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	EIF2AK2	P19525	551 aa	Known RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	CASQ1	P31415	396 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	COPB2	P35606	906 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	PSMC5	P62195	406 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	TUBB4B	P68371	445 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	PPAT	Q06203	517 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	ZNF720	Q7Z2F6	126 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	NELFCD	Q8IXH7	590 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	TNS4	Q8IZW8	715 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	DNER	Q8NFT8	737 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	NEK11	Q8NG66	645 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	PIGO	Q8TEQ8	1089 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	TMEM174	Q8WUU8	243 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	ERO1A	Q96HE7	468 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	LXN	Q9BS40	222 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	MKNK1	Q9BUB5	465 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	HOMER2	Q9NSB8	354 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	LARS	Q9P2J5	1176 aa	Known RBP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	DNAI1	Q9UI46	699 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	FZD1	Q9UP38	647 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	SIK3	Q9Y2K2	1263 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	DAAM1	Q9Y4D1	1078 aa		11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
ITSN1-231	ENST00000489261	EIF3CL	B5ME19	914 aa	Known RBP	11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	RNF225	M0QZC1	329 aa	Predicted RBP	11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	NDUFA10	O95299	355 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	GCNT3	O95395	438 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	EPB41	P11171	864 aa	Known RBP	11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	NR2F2	P24468	414 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	ABCD1	P33897	745 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	GNG11	P61952	73 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	ERVK-24	P63145	666 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	CACNB1	Q02641	598 aa	Predicted RBP	11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	PRKG1	Q13976	671 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	TMEM132B	Q14DG7	1078 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	GNPTAB	Q3T906	1256 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	PADI6	Q6TGC4	694 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	SLC30A10	Q6XR72	485 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	LBX2	Q6XYB7	198 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	OTUD6A	Q7L8S5	288 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	ERO1B	Q86YB8	467 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	FAM178B	Q8IXR5	827 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	IL31RA	Q8NI17	732 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	INPP4A	Q96PE3	977 aa	Predicted RBP	11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	EIF3C	Q99613	913 aa	Known RBP	11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	ST6GALNAC4	Q9H4F1	302 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	HAUS4	Q9H6D7	363 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	TMEM206	Q9H813	350 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	MMRN2	Q9H8L6	949 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	TSKS	Q9UJT2	592 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	PLAGL2	Q9UPG8	496 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	SNCAIP	Q9Y6H5	919 aa		11.93	□□□□□ -0.5
ITSN1-231	ENST00000489261	PFAS	O15067	1338 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	PRPF6	O94906	941 aa	Known RBP	11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	NR3C1	P04150	777 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	MYB	P10242	640 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	RAD51AP2	Q09MP3	1159 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	ITGB3BP	Q13352	177 aa	Predicted RBP	11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	VGLL4	Q14135	290 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	ARHGAP29	Q52LW3	1261 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	HS2ST1	Q7LGA3	356 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	RIOX2	Q8IUF8	465 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	SLC9A9	Q8IVB4	645 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	ANKRD13A	Q8IZ07	590 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	EHBP1	Q8NDI1	1231 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	GLIS3	Q8NEA6	775 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	DRC1	Q96MC2	740 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	C17orf75	Q9HAS0	396 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	PLCB1	Q9NQ66	1216 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	AGPAT5	Q9NUQ2	364 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	RNF186	Q9NXI6	227 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	CYP39A1	Q9NYL5	469 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	CEP72	Q9P209	647 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	MYO6	Q9UM54	1294 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	SAMM50	Q9Y512	469 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	RIPK3	Q9Y572	518 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	PCDHA10	Q9Y5I2	948 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	SMCHD1	A6NHR9	2005 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261	LOXHD1	Q8IVV2	1947 aa		11.92	□□□□□ -0.5
ITSN1-231	ENST00000489261		A0A0G2JLL6	359 aa	Predicted RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	GTPBP10	A4D1E9	387 aa	Known RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	RSPH10B2	B2RC85	870 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	SPATA31C2	B4DYI2	1134 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms