RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
HDAC6-232ENST00000489053 SH2B1Q9NRF2 756 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-232ENST00000489053 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-232ENST00000489053 CHD7Q9P2D1 2997 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 TRANK1O15050 2925 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 GPR182O15218 404 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 JAK2O60674 1132 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 ATP2B1P20020 1258 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 HMGN5P82970 282 aaKnown RBP10.26□□□□□ -0.77
HDAC6-232ENST00000489053 TAP1Q03518 808 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 RABEP1Q15276 862 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 PTPROQ16827 1216 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 XKR3Q5GH77 459 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 PPP4R3AQ6IN85 833 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 DIS3L2Q8IYB7 885 aaKnown RBP10.26□□□□□ -0.77
HDAC6-232ENST00000489053 ZNF710Q8N1W2 664 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 FIBCD1Q8N539 461 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 NSUN7Q8NE18 718 aaKnown RBP10.26□□□□□ -0.77
HDAC6-232ENST00000489053 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 LENG9Q96B70 501 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 C8orf76Q96K31 380 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 SAMD11Q96NU1 681 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 JPH2Q9BR39 696 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-232ENST00000489053 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
HDAC6-232ENST00000489053 SQORQ9Y6N5 450 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 IGSF9BQ9UPX0 1349 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 CDH23Q9H251 3354 aa10.26□□□□□ -0.77
HDAC6-232ENST00000489053 UNC80Q8N2C7 3258 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 LCHNA4D1U4 455 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 LINC01553A4QN01 128 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 DLL1O00548 723 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 TBX3O15119 743 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 DTNBO60941 627 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 PSMD10O75832 226 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 LARGE1O95461 756 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 CTDNEP1O95476 244 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 C22orf31O95567 290 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 MMP1P03956 469 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 VTNP04004 478 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 PSMC5P62195 406 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 CDC42EP1Q00587 391 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 MGAT3Q09327 533 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 BTG3Q14201 252 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-232ENST00000489053 CALCRLQ16602 461 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 KIZQ2M2Z5 673 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 MTERF2Q49AM1 385 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 KRT40Q6A162 431 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 NCAPH2Q6IBW4 605 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 EFCAB12Q6NXP0 572 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 FAM43BQ6ZT52 329 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-232ENST00000489053 EXOC8Q8IYI6 725 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 BANK1Q8NDB2 785 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 OXER1Q8TDS5 423 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 GJA10Q969M2 543 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 TOP1MTQ969P6 601 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 GJB4Q9NTQ9 266 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 THEGQ9P2T0 379 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 PADI3Q9ULW8 664 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 RWDD3Q9Y3V2 267 aa10.25□□□□□ -0.77
HDAC6-232ENST00000489053 PRUNE2Q8WUY3 3088 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 M0R2N6 131 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 RFXAPO00287 272 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 SLC37A4O43826 429 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 NEMFO60524 1076 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 ZSCAN20P17040 1043 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 CTNNB1P35222 781 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 QARSP47897 775 aaKnown RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 RBM25P49756 843 aaKnown RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 CLCN3P51790 818 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 CRYBB1P53674 252 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 POLGP54098 1239 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 GUCY1B3Q02153 619 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 NR5A1Q13285 461 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 ADGRE1Q14246 886 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 AAK1Q2M2I8 961 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 TMEM266Q2M3C6 531 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 SPOUT1Q5T280 376 aaKnown RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 KIAA0319LQ8IZA0 1049 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 LRRC71Q8N4P6 559 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 ETNPPLQ8TBG4 499 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 GDPD5Q8WTR4 605 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 SLC7A3Q8WY07 619 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 OSMRQ99650 979 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 NOL7Q9UMY1 257 aaKnown RBP10.24□□□□□ -0.77
HDAC6-232ENST00000489053 PCDHB7Q9Y5E2 793 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 KDM3AQ9Y4C1 1321 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 SCN5AQ14524 2016 aa10.24□□□□□ -0.77
HDAC6-232ENST00000489053 DOCK5Q9H7D0 1870 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-232ENST00000489053 BTBD18B2RXH4 712 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 ENPP3O14638 875 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 P4HBP07237 508 aaKnown RBP10.23□□□□□ -0.77
HDAC6-232ENST00000489053 ATP4AP20648 1035 aa10.23□□□□□ -0.77
HDAC6-232ENST00000489053 NLRP11P59045 1033 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms