RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 EPC2Q52LR7 807 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 LRCH2Q5VUJ6 765 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 KIAA0319LQ8IZA0 1049 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 GJA10Q969M2 543 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 IL17RAQ96F46 866 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 RIT2Q99578 217 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 TEKT3Q9BXF9 490 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 DISC1Q9NRI5 854 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 STK36Q9NRP7 1315 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 TCF20Q9UGU0 1960 aaKnown RBP26.01■■□□□ 1.75
COL9A3-213ENST00000489045 KIAA1671Q9BY89 1806 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 CHMP2AO43633 222 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 DTNBO60941 627 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 C22orf31O95567 290 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 ANKRD1Q15327 319 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 FTHL17Q9BXU8 183 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 UNC45AQ9H3U1 944 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 GINS2Q9Y248 185 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 XIRP2A4UGR9 3374 aa26■■□□□ 1.75
COL9A3-213ENST00000489045 ADGRA3Q8IWK6 1321 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 ATG2AQ2TAZ0 1938 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 CYP3A7-CYP3A51PA0A087WV96 503 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 CENPBP07199 599 aaPredicted RBP25.99■■□□□ 1.75
COL9A3-213ENST00000489045 CYP3A7P24462 503 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 NONOQ15233 471 aaKnown RBP eCLIP25.99■■□□□ 1.75
COL9A3-213ENST00000489045 KRT25Q7Z3Z0 450 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 FAM167AQ96KS9 214 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 PHF20Q9BVI0 1012 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 RC3H2Q9HBD1 1191 aaKnown RBP25.99■■□□□ 1.75
COL9A3-213ENST00000489045 BRWD1Q9NSI6 2320 aa25.99■■□□□ 1.75
COL9A3-213ENST00000489045 ZNF862O60290 1169 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 SFNP31947 248 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 JAK3P52333 1124 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 INF2Q27J81 1249 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 TMEM266Q2M3C6 531 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 RTN4RL1Q86UN2 441 aaPredicted RBP25.98■■□□□ 1.75
COL9A3-213ENST00000489045 TMEM192Q8IY95 271 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 FIBCD1Q8N539 461 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 IL27Q8NEV9 243 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 PPP1R16BQ96T49 567 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 CDHR5Q9HBB8 845 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 CEP131Q9UPN4 1083 aa25.98■■□□□ 1.75
COL9A3-213ENST00000489045 PSMD10O75832 226 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 CTDNEP1O95476 244 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 OATP04181 439 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 PRKCEQ02156 737 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 UGCGQ16739 394 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 MOXD1Q6UVY6 613 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 METTL13Q8N6R0 699 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 MBOAT7Q96N66 472 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 GJB4Q9NTQ9 266 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 COG5Q9UP83 839 aa25.97■■□□□ 1.75
COL9A3-213ENST00000489045 XBP1P17861 261 aa25.96■■□□□ 1.75
COL9A3-213ENST00000489045 GPM6BQ13491 265 aa25.96■■□□□ 1.75
COL9A3-213ENST00000489045 AAK1Q2M2I8 961 aa25.96■■□□□ 1.75
COL9A3-213ENST00000489045 ADAMTS19Q8TE59 1207 aa25.96■■□□□ 1.75
COL9A3-213ENST00000489045 TMEM40Q8WWA1 233 aa25.96■■□□□ 1.75
COL9A3-213ENST00000489045 ZNF689Q96CS4 500 aaPredicted RBP25.96■■□□□ 1.75
COL9A3-213ENST00000489045 TMX1Q9H3N1 280 aa25.96■■□□□ 1.75
COL9A3-213ENST00000489045 NOC2LQ9Y3T9 749 aaKnown RBP25.96■■□□□ 1.75
COL9A3-213ENST00000489045 NCOR1O75376 2440 aa25.95■■□□□ 1.75
COL9A3-213ENST00000489045 H3BNC9 293 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 RPS6KA5O75582 802 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 VTNP04004 478 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 CTNNB1P35222 781 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 CLCN3P51790 818 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 NFX1Q12986 1120 aaKnown RBP25.95■■□□□ 1.74
COL9A3-213ENST00000489045 KIZQ2M2Z5 673 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 MIER3Q7Z3K6 550 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 NPAS4Q8IUM7 802 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 ETNPPLQ8TBG4 499 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 HLA-CQ95604 372 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 ERVK-5Q9HDB9 667 aa25.95■■□□□ 1.74
COL9A3-213ENST00000489045 ORC3Q9UBD5 711 aaPredicted RBP25.95■■□□□ 1.74
COL9A3-213ENST00000489045 DDX25Q9UHL0 483 aaKnown RBP25.95■■□□□ 1.74
COL9A3-213ENST00000489045 CCDC194A0A1B0GVG4 234 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 MAGEB2O15479 319 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 SLC37A4O43826 429 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 EIF5BO60841 1220 aaKnown RBP25.94■■□□□ 1.74
COL9A3-213ENST00000489045 DGKIO75912 1065 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 LARGE1O95461 756 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 LINC00271P0C7V0 271 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 KCNQ1P51787 676 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 BTG3Q14201 252 aaPredicted RBP25.94■■□□□ 1.74
COL9A3-213ENST00000489045 ME3Q16798 604 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 LETM2Q2VYF4 491 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 CRIPAKQ8N1N5 446 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 NECAB1Q8N987 351 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 RDM1Q8NG50 284 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 MRPL38Q96DV4 380 aaKnown RBP25.94■■□□□ 1.74
COL9A3-213ENST00000489045 OSMRQ99650 979 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 NRBP2Q9NSY0 501 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 BDP1A6H8Y1 2624 aa25.94■■□□□ 1.74
COL9A3-213ENST00000489045 GPR32O75388 356 aa25.93■■□□□ 1.74
COL9A3-213ENST00000489045 SEC24BO95487 1268 aa25.93■■□□□ 1.74
COL9A3-213ENST00000489045 CRYBB1P53674 252 aaPredicted RBP25.93■■□□□ 1.74
COL9A3-213ENST00000489045 PTPROQ16827 1216 aa25.93■■□□□ 1.74
COL9A3-213ENST00000489045 B3GNT9Q6UX72 402 aa25.93■■□□□ 1.74
COL9A3-213ENST00000489045 OXER1Q8TDS5 423 aa25.93■■□□□ 1.74
COL9A3-213ENST00000489045 GTF3C6Q969F1 213 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms