RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 APOL5Q9BWW9 433 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 TRPV2Q9Y5S1 764 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 PTPRZ1P23471 2315 aaPredicted RBP13.08□□□□□ -0.32
USP11-210ENST00000489030 PLXNA4Q9HCM2 1894 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 PDGFBP01127 241 aaPredicted RBP13.07□□□□□ -0.32
USP11-210ENST00000489030 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
USP11-210ENST00000489030 EVCP57679 992 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 TRAF1Q13077 416 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 MTMR1Q13613 665 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 FAM102BQ5T8I3 360 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 ATP8B4Q8TF62 1192 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 SUSD6Q92537 303 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 CUL5Q93034 780 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 PPP1R16BQ96T49 567 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 MAP3K14Q99558 947 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
USP11-210ENST00000489030 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 ERVK-5Q9HDB9 667 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 JADE2Q9NQC1 790 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 LOXHD1Q8IVV2 1947 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 IGSF9BQ9UPX0 1349 aa13.07□□□□□ -0.32
USP11-210ENST00000489030 KMT2EQ8IZD2 1858 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 KLF18A0A0U1RQI7 1052 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 ZBTB43O43298 467 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 ARP10275 920 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 RCAN1P53805 252 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 PAK2Q13177 524 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
USP11-210ENST00000489030 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
USP11-210ENST00000489030 FEZF2Q8TBJ5 459 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 SNX21Q969T3 373 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 SNX27Q96L92 541 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 PHF7Q9BWX1 381 aaPredicted RBP13.06□□□□□ -0.32
USP11-210ENST00000489030 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
USP11-210ENST00000489030 PCDHA6Q9UN73 950 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 NOC2LQ9Y3T9 749 aaKnown RBP13.06□□□□□ -0.32
USP11-210ENST00000489030 PCDHA8Q9Y5H6 950 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 PCDHA2Q9Y5H9 948 aa13.06□□□□□ -0.32
USP11-210ENST00000489030 TBKBP1A7MCY6 615 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 FSCN2O14926 492 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 DDAH1O94760 285 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 CCNE2O96020 404 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 FGFR1P11362 822 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 SARSP49591 514 aaKnown RBP13.05□□□□□ -0.32
USP11-210ENST00000489030 ACTR2P61160 394 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
USP11-210ENST00000489030 DUSP6Q16828 381 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 NAALADL2Q58DX5 795 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 IER5Q5VY09 327 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 SYCE2Q6PIF2 218 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 APOA5Q6Q788 366 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 MTHFD1LQ6UB35 978 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 FBXL6Q8N531 539 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
USP11-210ENST00000489030 S1PR5Q9H228 398 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 SMOC2Q9H3U7 446 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 TLE6Q9H808 572 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 JPH1Q9HDC5 661 aaPredicted RBP13.05□□□□□ -0.32
USP11-210ENST00000489030 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
USP11-210ENST00000489030 KCNH7Q9NS40 1196 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 SLC9A2Q9UBY0 812 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 BRPF3Q9ULD4 1205 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 GINS2Q9Y248 185 aa13.05□□□□□ -0.32
USP11-210ENST00000489030 CFAP54Q96N23 3096 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 RRN3P2A6NIE6 340 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 FGF18O76093 207 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
USP11-210ENST00000489030 KIF5BP33176 963 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 PBX3P40426 434 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 PTPN5P54829 565 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 KRT76Q01546 638 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 KCNC3Q14003 757 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 HSCBQ8IWL3 235 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 KIAA0319LQ8IZA0 1049 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 FANCBQ8NB91 859 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 COLGALT1Q8NBJ5 622 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 MICAL1Q8TDZ2 1067 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
USP11-210ENST00000489030 FTHL17Q9BXU8 183 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
USP11-210ENST00000489030 CWH43Q9H720 699 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 RNF19AQ9NV58 838 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 TYW1Q9NV66 732 aaKnown RBP13.04□□□□□ -0.32
USP11-210ENST00000489030 RBM28Q9NW13 759 aaKnown RBP13.04□□□□□ -0.32
USP11-210ENST00000489030 TMEM260Q9NX78 707 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 SEC63Q9UGP8 760 aaKnown RBP13.04□□□□□ -0.32
USP11-210ENST00000489030 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
USP11-210ENST00000489030 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
USP11-210ENST00000489030 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
USP11-210ENST00000489030 ZBTB42B2RXF5 422 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms