RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 DAAM1Q9Y4D1 1078 aa7.32□□□□□ -1.24
HDLBP-243ENST00000488923 WASF2Q9Y6W5 498 aa7.32□□□□□ -1.24
HDLBP-243ENST00000488923 TTC26A0AVF1 554 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 CTAGE9A4FU28 777 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 SOWAHDA6NJG2 315 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 EFCAB8A8MWE9 144 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 EIF3CLB5ME19 914 aaKnown RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 C19orf81C9J6K1 198 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 E9PMD0 336 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 FZD9O00144 591 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 TRAF5O00463 557 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 MEIS1O00470 390 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 PDXKO00764 312 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 EIF3DO15371 548 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 SLC16A3O15427 465 aaKnown RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 MAFGO15525 162 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 KRT86O43790 486 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 PPP1R12BO60237 982 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 DKC1O60832 514 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 MED24O75448 989 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 PSMD10O75832 226 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 URI1O94763 535 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 NDUFA10O95299 355 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 EPS15P42566 896 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 SPA17Q15506 151 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 NFIL3Q16649 462 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 BMT2Q1RMZ1 405 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 SHROOM1Q2M3G4 852 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 CCDC40Q4G0X9 1142 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 CCDC174Q6PII3 467 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 RAD9BQ6WBX8 426 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 LRRC55Q6ZSA7 311 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 TOGARAM2Q6ZUX3 1019 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 OTOP1Q7RTM1 612 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 KCNK18Q7Z418 384 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 ZC3H3Q8IXZ2 948 aaKnown RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 CEP112Q8N8E3 955 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 SLC17A8Q8NDX2 589 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 RDM1Q8NG50 284 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 NEK11Q8NG66 645 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 UBXN4Q92575 508 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 SYN2Q92777 582 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 HLA-CQ95604 372 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 EIF3CQ99613 913 aaKnown RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 MXRA8Q9BRK3 442 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 ZNF577Q9BSK1 485 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 TTYH3Q9C0H2 523 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 PICK1Q9NRD5 415 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 TBC1D22BQ9NU19 505 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 TYW1Q9NV66 732 aaKnown RBP7.31□□□□□ -1.24
HDLBP-243ENST00000488923 TRAF3IP3Q9Y228 551 aa7.31□□□□□ -1.24
HDLBP-243ENST00000488923 MYPNQ86TC9 1320 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 RPTORQ8N122 1335 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 RNF225M0QZC1 329 aaPredicted RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 NFKBIEO00221 500 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 SIAH2O43255 324 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 USO1O60763 962 aaKnown RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 FAM13AO94988 1023 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 SPATA31C1P0DKV0 1188 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 SLURP2P0DP57 97 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 MAPTP10636 758 aaKnown RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 ANXA13P27216 316 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 HOXA13P31271 388 aaPredicted RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 ABCD1P33897 745 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 GMPSP49915 693 aaPredicted RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 SNRPFP62306 86 aaKnown RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 NCBP1Q09161 790 aaKnown RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 GIT2Q14161 759 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 MYBPC2Q14324 1141 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 ECM1Q16610 540 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 KNOP1Q1ED39 458 aaKnown RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 NBPF9Q3BBW0 867 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 TKFCQ3LXA3 575 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 SUPT20HL1Q3ZLR7 823 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 MIIPQ5JXC2 388 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 PCNX4Q63HM2 1172 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 MIGA2Q7L4E1 593 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 CACNA2D4Q7Z3S7 1137 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 FRMD5Q7Z6J6 570 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 SCYL3Q8IZE3 742 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 C12orf42Q96LP6 360 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 CCDC42Q96M95 316 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 TEPSINQ96N21 525 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 IWS1Q96ST2 819 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 HSD17B14Q9BPX1 270 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 MKNK1Q9BUB5 465 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 TANGO6Q9C0B7 1094 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 PDGFDQ9GZP0 370 aaPredicted RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 ZHX3Q9H4I2 956 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 SLC38A10Q9HBR0 1119 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 CNOT7Q9UIV1 285 aaKnown RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 ZNF112Q9UJU3 913 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 ZNF215Q9UL58 517 aaPredicted RBP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 PPP1R9AQ9ULJ8 1098 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 MYO6Q9UM54 1294 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 PLAGL2Q9UPG8 496 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 PCDHA2Q9Y5H9 948 aa7.3□□□□□ -1.24
HDLBP-243ENST00000488923 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDLBP-243ENST00000488923 COL4A5P29400 1685 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms