RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 RC3H2Q9HBD1 1191 aaKnown RBP25.58■■□□□ 1.69
PTPN4-211ENST00000488279 PDRG1Q9NUG6 133 aa25.58■■□□□ 1.69
PTPN4-211ENST00000488279 GABBR1Q9UBS5 961 aa25.58■■□□□ 1.69
PTPN4-211ENST00000488279 PCDHA4Q9UN74 947 aa25.58■■□□□ 1.69
PTPN4-211ENST00000488279 CEP131Q9UPN4 1083 aa25.58■■□□□ 1.69
PTPN4-211ENST00000488279 COL4A6Q14031 1691 aa25.58■■□□□ 1.68
PTPN4-211ENST00000488279 WDR64B1ANS9 1081 aa25.57■■□□□ 1.68
PTPN4-211ENST00000488279 C5orf67F2Z3F1 127 aa25.57■■□□□ 1.68
PTPN4-211ENST00000488279 STAG3L1P0CL83 205 aa25.57■■□□□ 1.68
PTPN4-211ENST00000488279 NFX1Q12986 1120 aaKnown RBP25.57■■□□□ 1.68
PTPN4-211ENST00000488279 STK3Q13188 491 aa25.57■■□□□ 1.68
PTPN4-211ENST00000488279 TMEM266Q2M3C6 531 aa25.57■■□□□ 1.68
PTPN4-211ENST00000488279 NPAS4Q8IUM7 802 aa25.57■■□□□ 1.68
PTPN4-211ENST00000488279 CLP1Q92989 425 aaKnown RBP25.57■■□□□ 1.68
PTPN4-211ENST00000488279 C11orf84Q9BUA3 381 aaPredicted RBP25.57■■□□□ 1.68
PTPN4-211ENST00000488279 BDP1A6H8Y1 2624 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 MSH4O15457 936 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 EDIL3O43854 480 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 ODR4Q5SWX8 454 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 CRIPAKQ8N1N5 446 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 METTL13Q8N6R0 699 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 TBCKQ8TEA7 893 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 RIT2Q99578 217 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 CDHR5Q9HBB8 845 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 DISC1Q9NRI5 854 aa25.56■■□□□ 1.68
PTPN4-211ENST00000488279 GAS7O60861 476 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 RPS6KA5O75582 802 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 C22orf31O95567 290 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 LINC00271P0C7V0 271 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 GALNT17Q6IS24 598 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 BLIDQ8IZY5 108 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 FAM177A1Q8N128 213 aaPredicted RBP25.55■■□□□ 1.68
PTPN4-211ENST00000488279 FAM167AQ96KS9 214 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 TMX1Q9H3N1 280 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 NRBP2Q9NSY0 501 aa25.55■■□□□ 1.68
PTPN4-211ENST00000488279 MAGEB2O15479 319 aa25.54■■□□□ 1.68
PTPN4-211ENST00000488279 KCNA5P22460 613 aa25.54■■□□□ 1.68
PTPN4-211ENST00000488279 CRYBB1P53674 252 aaPredicted RBP25.54■■□□□ 1.68
PTPN4-211ENST00000488279 CMTR2Q8IYT2 770 aaKnown RBP25.54■■□□□ 1.68
PTPN4-211ENST00000488279 SLC5A5Q92911 643 aa25.54■■□□□ 1.68
PTPN4-211ENST00000488279 PLVAPQ9BX97 442 aa25.54■■□□□ 1.68
PTPN4-211ENST00000488279 NSUN3Q9H649 340 aaKnown RBP25.54■■□□□ 1.68
PTPN4-211ENST00000488279 ERVK-5Q9HDB9 667 aa25.54■■□□□ 1.68
PTPN4-211ENST00000488279 LRFN2Q9ULH4 789 aa25.54■■□□□ 1.68
PTPN4-211ENST00000488279 NOC2LQ9Y3T9 749 aaKnown RBP25.54■■□□□ 1.68
PTPN4-211ENST00000488279 TCF20Q9UGU0 1960 aaKnown RBP25.54■■□□□ 1.68
PTPN4-211ENST00000488279 TTC3P53804 2025 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 GPR182O15218 404 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 SFNP31947 248 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 LEXMQ3ZCV2 418 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 Q4G0T1 1027 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 LRCH2Q5VUJ6 765 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 TEKT3Q9BXF9 490 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 LMAN2LQ9H0V9 348 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 RNF216Q9NWF9 866 aaPredicted RBP25.53■■□□□ 1.68
PTPN4-211ENST00000488279 PPP4R2Q9NY27 417 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 ST3GAL5Q9UNP4 418 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 NCOR1O75376 2440 aa25.53■■□□□ 1.68
PTPN4-211ENST00000488279 CYP3A7-CYP3A51PA0A087WV96 503 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 DENND3A2RUS2 1198 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 CHMP2AO43633 222 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 CDKL5O76039 1030 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 CYP3A7P24462 503 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 TMOD1P28289 359 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 JAK3P52333 1124 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 KIZQ2M2Z5 673 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 TCEAL5Q5H9L2 206 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 TMEM40Q8WWA1 233 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 PCDHB7Q9Y5E2 793 aa25.52■■□□□ 1.68
PTPN4-211ENST00000488279 M0R2N6 131 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 VTNP04004 478 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 OATP04181 439 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 SARSP49591 514 aaKnown RBP25.51■■□□□ 1.67
PTPN4-211ENST00000488279 EFCAB12Q6NXP0 572 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 DAGLBQ8NCG7 672 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 PPP1R16BQ96T49 567 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 OSMRQ99650 979 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 ADAM2Q99965 735 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 UNC45AQ9H3U1 944 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 RGS18Q9NS28 235 aa25.51■■□□□ 1.67
PTPN4-211ENST00000488279 MRPL42Q9Y6G3 142 aaKnown RBP25.51■■□□□ 1.67
PTPN4-211ENST00000488279 GRM6O15303 877 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 ZNF862O60290 1169 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 GPR32O75388 356 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 IBSPP21815 317 aaPredicted RBP25.5■■□□□ 1.67
PTPN4-211ENST00000488279 PAN2Q504Q3 1202 aaKnown RBP25.5■■□□□ 1.67
PTPN4-211ENST00000488279 ZNF710Q8N1W2 664 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 GJA10Q969M2 543 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 PABPC5Q96DU9 382 aaKnown RBP25.5■■□□□ 1.67
PTPN4-211ENST00000488279 AIFM3Q96NN9 605 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 MAP7D2Q96T17 732 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 SLKQ9H2G2 1235 aaPredicted RBP25.5■■□□□ 1.67
PTPN4-211ENST00000488279 C1orf112Q9NSG2 853 aa25.5■■□□□ 1.67
PTPN4-211ENST00000488279 NCK2O43639 380 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 MGEA5O60502 916 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 PSMD10O75832 226 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 TDP2O95551 362 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 CLCN3P51790 818 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 PRKCEQ02156 737 aa25.49■■□□□ 1.67
PTPN4-211ENST00000488279 SCRN1Q12765 414 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms