RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 H3BQ06 376 aaPredicted RBP12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 M0R2N6 131 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 MSH4O15457 936 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 VTNP04004 478 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 IL9P15248 144 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 IBSPP21815 317 aaPredicted RBP12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 DNAJB1P25685 340 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 PSMA5P28066 241 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 GNA11P29992 359 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 BMPR1AP36894 532 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 SETQ01105 290 aaPredicted RBP12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 PAK2Q13177 524 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 STK3Q13188 491 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 BTG3Q14201 252 aaPredicted RBP12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 FAM160B1Q5W0V3 765 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 ERVK-5Q9HDB9 667 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 GABBR1Q9UBS5 961 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 SQORQ9Y6N5 450 aa12.73□□□□□ -0.37
PCYT1A-215ENST00000488235 GPR32O75388 356 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 TDP2O95551 362 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 GTF2F1P35269 517 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 CLCN3P51790 818 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 AKAP17AQ02040 695 aaKnown RBP12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 DLX2Q07687 328 aaPredicted RBP12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 NFX1Q12986 1120 aaKnown RBP12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 COL19A1Q14993 1142 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 KIZQ2M2Z5 673 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 ZNF484Q5JVG2 852 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 FAM228AQ86W67 206 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 NPAS4Q8IUM7 802 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 NME8Q8N427 588 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 NEK9Q8TD19 979 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 OSMRQ99650 979 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 UNC45AQ9H3U1 944 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 ALG13Q9NP73 1137 aaKnown RBP12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 GJB4Q9NTQ9 266 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 TBC1D22BQ9NU19 505 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 PCDHA10Q9Y5I2 948 aa12.72□□□□□ -0.37
PCYT1A-215ENST00000488235 COL1A2P08123 1366 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 TMEM150BA6NC51 233 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 M0QZ92 97 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 CHMP2AO43633 222 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 RPLP2P05387 115 aaKnown RBP12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 COL9A1P20849 921 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 LTBRP36941 435 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 NLRP5P59047 1200 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 HYAL1Q12794 435 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 PTPROQ16827 1216 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 TIGD5Q53EQ6 642 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 FAM102BQ5T8I3 360 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 CKAP2LQ8IYA6 745 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 SMAP1Q8IYB5 467 aaPredicted RBP12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 LRRC71Q8N4P6 559 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 LINC01465Q8N7H1 131 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 TBCKQ8TEA7 893 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 SLC5A5Q92911 643 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 FTHL17Q9BXU8 183 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 ST3GAL5Q9UNP4 418 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 PCDHGC5Q9Y5F6 944 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 CYP46A1Q9Y6A2 500 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 RALGAPA2Q2PPJ7 1873 aa12.71□□□□□ -0.37
PCYT1A-215ENST00000488235 EVPLQ92817 2033 aa12.71□□□□□ -0.38
PCYT1A-215ENST00000488235 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 LINC01565O15544 149 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 ITGB1P05556 798 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 RB1P06400 928 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 PSAPP07602 524 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 IRS1P35568 1242 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 PRKCEQ02156 737 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 DRP2Q13474 957 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 MCTP2Q6DN12 878 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 CMTR2Q8IYT2 770 aaKnown RBP12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 METTL13Q8N6R0 699 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 BICD2Q8TD16 824 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 PABPC5Q96DU9 382 aaKnown RBP12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 ADAM2Q99965 735 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 C11orf84Q9BUA3 381 aaPredicted RBP12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 C11orf16Q9NQ32 467 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 SH3GLB2Q9NR46 395 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 DISC1Q9NRI5 854 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 PLAGL2Q9UPG8 496 aa12.7□□□□□ -0.38
PCYT1A-215ENST00000488235 SAMM50Q9Y512 469 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms