RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CTNNB1P35222 781 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 SCRN1Q12765 414 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 BTG3Q14201 252 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 AAK1Q2M2I8 961 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 PAN2Q504Q3 1202 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 KIAA0319LQ8IZA0 1049 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 ZNF668Q96K58 619 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 SH3GLB2Q9NR46 395 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 PCDHA4Q9UN74 947 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 COG5Q9UP83 839 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 MAFBQ9Y5Q3 323 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 IGSF9BQ9UPX0 1349 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 COL4A6Q14031 1691 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 WDR64B1ANS9 1081 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 GAS7O60861 476 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 VTNP04004 478 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 GATMP50440 423 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 USP11P51784 963 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 CLCN3P51790 818 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 SMAP1Q8IYB5 467 aaPredicted RBP12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 NME8Q8N427 588 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 TMEM40Q8WWA1 233 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 SAMD11Q96NU1 681 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 OSMRQ99650 979 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 TEKT3Q9BXF9 490 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 TMX1Q9H3N1 280 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 UNC45AQ9H3U1 944 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 GJB4Q9NTQ9 266 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 NOC2LQ9Y3T9 749 aaKnown RBP12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 ADGRA3Q8IWK6 1321 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 COL1A2P08123 1366 aa12.78□□□□□ -0.36
NIPAL3-207ENST00000488155 MUC3AQ02505 3323 aa12.77□□□□□ -0.36
NIPAL3-207ENST00000488155 H3BNC9 293 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 ZNF862O60290 1169 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 MGEA5O60502 916 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 RPS6KA5O75582 802 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 C22orf31O95567 290 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 RPLP2P05387 115 aaKnown RBP12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 NPY5RQ15761 445 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 UGCGQ16739 394 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 PTPROQ16827 1216 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 INF2Q27J81 1249 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 LRCH2Q5VUJ6 765 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 LRRC71Q8N4P6 559 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 SLC5A5Q92911 643 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 MRPL38Q96DV4 380 aaKnown RBP12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 FTHL17Q9BXU8 183 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 LRFN2Q9ULH4 789 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 KDM3AQ9Y4C1 1321 aa12.77□□□□□ -0.37
NIPAL3-207ENST00000488155 M0R2N6 131 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 GRM6O15303 877 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 DGKIO75912 1065 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 KCNA5P22460 613 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 BMPR1AP36894 532 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 AK2P54819 239 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 PRKCEQ02156 737 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 TCEAL5Q5H9L2 206 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 EFCAB12Q6NXP0 572 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 MIER3Q7Z3K6 550 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 ZNF689Q96CS4 500 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 SH2D3AQ9BRG2 576 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 UBE2ZQ9H832 354 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 RC3H2Q9HBD1 1191 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 ERVK-5Q9HDB9 667 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 ST3GAL5Q9UNP4 418 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 AKT3Q9Y243 479 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 MRPL42Q9Y6G3 142 aaKnown RBP12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 ARID2Q68CP9 1835 aa12.76□□□□□ -0.37
NIPAL3-207ENST00000488155 DENND3A2RUS2 1198 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 TMEM150BA6NC51 233 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 PFKFB2O60825 505 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 OATP04181 439 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 LINC00271P0C7V0 271 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 STAG3L1P0CL83 205 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 FOSBP53539 338 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 NLRP11P59045 1033 aaKnown RBP12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 NONOQ15233 471 aaKnown RBP eCLIP12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 LETM2Q2VYF4 491 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 MTERF2Q49AM1 385 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 Q4G0T1 1027 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 NPAS4Q8IUM7 802 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 FAM167AQ96KS9 214 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 RIT2Q99578 217 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 ADAM2Q99965 735 aa12.75□□□□□ -0.37
NIPAL3-207ENST00000488155 ALG13Q9NP73 1137 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms