RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 IQCF3P0C7M6 154 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 CCT6AP40227 531 aaKnown RBP19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 CLCN3P51790 818 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 ZRSR1Q15695 479 aaKnown RBP19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 XKR3Q5GH77 459 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 ZNF484Q5JVG2 852 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 MFSD5Q6N075 450 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 KCNK18Q7Z418 384 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 DEFB128Q7Z7B8 93 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 PNMA5Q96PV4 448 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 GDF15Q99988 308 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 CDHR5Q9HBB8 845 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 POLD4Q9HCU8 107 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 NRBP2Q9NSY0 501 aa19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 FBXO2Q9UK22 296 aaPredicted RBP19.21■□□□□ 0.67
SHROOM1-205ENST00000488072 YWHABP31946 246 aaKnown RBP19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 PRPHP41219 470 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 TMEM266Q2M3C6 531 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 C9orf50Q5SZB4 431 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 C4orf19Q8IY42 314 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 KIAA0319LQ8IZA0 1049 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 METTL13Q8N6R0 699 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 SNX29Q8TEQ0 813 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 NIFKQ9BYG3 293 aaKnown RBP19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 CSRNP2Q9H175 543 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 ZSWIM4Q9H7M6 989 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 SUGCTQ9HAC7 445 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 LTBP2Q14767 1821 aa19.2■□□□□ 0.66
SHROOM1-205ENST00000488072 LAD1O00515 517 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 NBNO60934 754 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 CHRNA1P02708 482 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 GNAT1P11488 350 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 XKR9Q5GH70 373 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 LINC01465Q8N7H1 131 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 LINC00301Q8NCQ3 95 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 FAM167AQ96KS9 214 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 LBHD1Q9BQE6 289 aaPredicted RBP19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 POLR3CQ9BUI4 534 aaPredicted RBP19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 CYP26B1Q9NR63 512 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 KIAA1024Q9UPX6 916 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 COLQQ9Y215 455 aaPredicted RBP19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 PCDHA2Q9Y5H9 948 aa19.19■□□□□ 0.66
SHROOM1-205ENST00000488072 WDR81Q562E7 1941 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 E9PMD0 336 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 VTNP04004 478 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 SELPP16109 830 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 ANP32AP39687 249 aaKnown RBP19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 MGAT3Q09327 533 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 GRB10Q13322 594 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 PDIA5Q14554 519 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 SLC39A14Q15043 492 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 STK38Q15208 465 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 EFCAB12Q6NXP0 572 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 LRRC8DQ7L1W4 858 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 RETREG2Q8NC44 543 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 EPSTI1Q96J88 318 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 CEP170P1Q96L14 293 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 PRO3102Q9H379 93 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 COL1A2P08123 1366 aa19.18■□□□□ 0.66
SHROOM1-205ENST00000488072 LYPLA2O95372 231 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 RPA1P27694 616 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 FPGSQ05932 587 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 RBL2Q08999 1139 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 BFSP2Q13515 415 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 PRPF38BQ5VTL8 546 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 ARL6IP4Q66PJ3 421 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 MAEAQ7L5Y9 396 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 KSR1Q8IVT5 923 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 TMEM143Q96AN5 459 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 ZNF396Q96N95 335 aaPredicted RBP19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 TUFT1Q9NNX1 390 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 XPNPEP1Q9NQW7 623 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 DDX19AQ9NUU7 478 aaKnown RBP19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 CDY2AQ9Y6F7 541 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 SCN5AQ14524 2016 aa19.17■□□□□ 0.66
SHROOM1-205ENST00000488072 SMIM35A0A1B0GVV1 85 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 RSPH10B2B2RC85 870 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 RSPH10BP0C881 870 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 TBC1D8BQ0IIM8 1120 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 SHHQ15465 462 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 TPRNQ4KMQ1 711 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 ZNF365Q70YC5 407 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 ERMNQ8TAM6 284 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 CAGE1Q8TC20 777 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 PANK2Q9BZ23 570 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 UBE2OQ9C0C9 1292 aaKnown RBP19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 GDPD2Q9HCC8 539 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 GINS2Q9Y248 185 aa19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 SRPRBQ9Y5M8 271 aaKnown RBP19.16■□□□□ 0.66
SHROOM1-205ENST00000488072 MYH9P35579 1960 aaKnown RBP19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 IGKV6-21A0A0C4DH24 114 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 PITPNM1O00562 1244 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 SPTLC2O15270 562 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 MAFO75444 373 aaPredicted RBP19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 CSDE1O75534 798 aaKnown RBP19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 RARRES1P49788 294 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 MRPS6P82932 125 aaKnown RBP19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 KARSQ15046 597 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms