RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
PKD1-220ENST00000487932 UPF3AQ9H1J1 476 aaKnown RBP16.44■□□□□ 0.22
PKD1-220ENST00000487932 LMBRD1Q9NUN5 540 aa16.44■□□□□ 0.22
PKD1-220ENST00000487932 RNF181Q9P0P0 153 aa16.44■□□□□ 0.22
PKD1-220ENST00000487932 A0A087WWV3 80 aa16.44■□□□□ 0.22
PKD1-220ENST00000487932 AP1B1Q10567 949 aa16.44■□□□□ 0.22
PKD1-220ENST00000487932 KLHL29Q96CT2 875 aa16.44■□□□□ 0.22
PKD1-220ENST00000487932 SMYD3Q9H7B4 428 aa16.44■□□□□ 0.22
PKD1-220ENST00000487932 LRRC8AQ8IWT6 810 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 SPTLC3Q9NUV7 552 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 CUL7Q14999 1698 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
PKD1-220ENST00000487932 LAD1O00515 517 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 NRBF2Q96F24 287 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 HEMGNQ9BXL5 484 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 SIK2Q9H0K1 926 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 JRKLQ9Y4A0 524 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 VGLL3A8MV65 326 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 SASH1O94885 1247 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 GRAMD1BQ3KR37 738 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 RAET1EQ8TD07 263 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 FBXO41Q8TF61 875 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 CCDC90BQ9GZT6 254 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 VPS11Q9H270 941 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 TRIM45Q9H8W5 580 aaPredicted RBP16.43■□□□□ 0.22
PKD1-220ENST00000487932 TLR7Q9NYK1 1049 aaKnown RBP16.43■□□□□ 0.22
PKD1-220ENST00000487932 PGRMC1O00264 195 aaKnown RBP16.43■□□□□ 0.22
PKD1-220ENST00000487932 GH2P01242 217 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 SERPINI1Q99574 410 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 IQANK1A0A1B0GTG1 560 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 DFFAO00273 331 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 FAM81BQ96LP2 452 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 TRPV6Q9H1D0 765 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 POLD4Q9HCU8 107 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 ABCB11O95342 1321 aa16.43■□□□□ 0.22
PKD1-220ENST00000487932 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
PKD1-220ENST00000487932 SLC8A1P32418 973 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 MMP19Q99542 508 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 FGFR1OP2Q9NVK5 253 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 CHCHD3Q9NX63 227 aaKnown RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 TMEM63CQ9P1W3 806 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 CLDN3O15551 220 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 ESRRAP11474 423 aaPredicted RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 GPC3P51654 580 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 MAN2A1Q16706 1144 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 ZNF699Q32M78 642 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 MFSD14CQ5VZR4 134 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 BBOX1O75936 387 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 PSMC1P62191 440 aaKnown RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 ADCK2Q7Z695 626 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 RASSF3Q86WH2 238 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 ABCC4O15439 1325 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 MTMR1Q13613 665 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 STXBP2Q15833 593 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 BZW1Q7L1Q6 419 aaKnown RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 OTUD5Q96G74 571 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 LBHD1Q9BQE6 289 aaPredicted RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 KLC2Q9H0B6 622 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 LUC7L3O95232 432 aaKnown RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 CENPUQ71F23 418 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 NAF1Q96HR8 494 aaKnown RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 DHX36Q9H2U1 1008 aaKnown RBP16.42■□□□□ 0.22
PKD1-220ENST00000487932 SAYSD1Q9NPB0 183 aa16.42■□□□□ 0.22
PKD1-220ENST00000487932 ZNF658Q5TYW1 1059 aaPredicted RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 RFWD2Q8NHY2 731 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 DHTKD1Q96HY7 919 aaPredicted RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 GSDMAQ96QA5 445 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 PLCG1P19174 1290 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 MRPS25P82663 173 aaKnown RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 CCNYL1Q8N7R7 359 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 BEST2Q8NFU1 509 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 DNAJC7Q99615 494 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 MAGEF1Q9HAY2 307 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 PCDHA5Q9Y5H7 936 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 ABCC12Q96J65 1359 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 CTNND1O60716 968 aaKnown RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 SRGAP2O75044 1071 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 EIF4A3P38919 411 aaKnown RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 WASHC5Q12768 1159 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 NR5A1Q13285 461 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 RRM2BQ7LG56 351 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 A0A0G2JND7 137 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 MMP10P09238 476 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 DR1Q01658 176 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 SLFN12LQ6IEE8 588 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 WARS2Q9UGM6 360 aaKnown RBP16.41■□□□□ 0.22
PKD1-220ENST00000487932 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
PKD1-220ENST00000487932 PIK3R2O00459 728 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 RASGRF2O14827 1237 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 ARIH2O95376 493 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 IRF1P10914 325 aa16.4■□□□□ 0.22
PKD1-220ENST00000487932 ABCD1P33897 745 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms