RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 FOXR2Q6PJQ5 311 aa15.75■□□□□ 0.11
CUX1-209ENST00000487284 BHMT2Q9H2M3 363 aa15.75■□□□□ 0.11
CUX1-209ENST00000487284 JPH1Q9HDC5 661 aaPredicted RBP15.75■□□□□ 0.11
CUX1-209ENST00000487284 SLC39A2Q9NP94 309 aa15.75■□□□□ 0.11
CUX1-209ENST00000487284 SLC9A2Q9UBY0 812 aa15.75■□□□□ 0.11
CUX1-209ENST00000487284 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
CUX1-209ENST00000487284 ADCY6O43306 1168 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 ADCY3O60266 1144 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 FARP2O94887 1054 aaPredicted RBP15.74■□□□□ 0.11
CUX1-209ENST00000487284 TRIM32Q13049 653 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 MFSD14CQ5VZR4 134 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 CENPPQ6IPU0 288 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 VSTM4Q8IW00 320 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 TPH2Q8IWU9 490 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 RAET1EQ8TD07 263 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 NOC3LQ8WTT2 800 aaKnown RBP15.74■□□□□ 0.11
CUX1-209ENST00000487284 ZNF830Q96NB3 372 aaPredicted RBP15.74■□□□□ 0.11
CUX1-209ENST00000487284 NACC1Q96RE7 527 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 CTAGE1Q96RT6 745 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 DUSP9Q99956 384 aaKnown RBP15.74■□□□□ 0.11
CUX1-209ENST00000487284 LXNQ9BS40 222 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 THAP9Q9H5L6 903 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
CUX1-209ENST00000487284 WRAP73Q9P2S5 460 aaPredicted RBP15.74■□□□□ 0.11
CUX1-209ENST00000487284 TCEAL9Q9UHQ7 104 aa15.74■□□□□ 0.11
CUX1-209ENST00000487284 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 KRT18P05783 430 aaKnown RBP15.73■□□□□ 0.11
CUX1-209ENST00000487284 JAK3P52333 1124 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 GSDMDP57764 484 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 GIT2Q14161 759 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
CUX1-209ENST00000487284 METTL7BQ6UX53 244 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 TMC6Q7Z403 805 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 IRF2BP1Q8IU81 584 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 TRPV1Q8NER1 839 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 RDM1Q8NG50 284 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 REEP2Q9BRK0 252 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 SAMM50Q9Y512 469 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 PCDHA2Q9Y5H9 948 aa15.73■□□□□ 0.11
CUX1-209ENST00000487284 LRRC10BA6NIK2 292 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 WDR64B1ANS9 1081 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 LYPLA2O95372 231 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 P4HBP07237 508 aaKnown RBP15.72■□□□□ 0.11
CUX1-209ENST00000487284 HSPA8P11142 646 aaKnown RBP15.72■□□□□ 0.11
CUX1-209ENST00000487284 CYBAP13498 195 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 SMPD1P17405 629 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 SFNP31947 248 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 PRMT2P55345 433 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 ACTR2P61160 394 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 ARHGAP1Q07960 439 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 NR1I3Q14994 352 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 TCP11X2Q5H9J9 407 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 CELF3Q5SZQ8 465 aaKnown RBP15.72■□□□□ 0.11
CUX1-209ENST00000487284 ANKRD40Q6AI12 368 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 FILIP1Q7Z7B0 1213 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 DHX37Q8IY37 1157 aaKnown RBP15.72■□□□□ 0.11
CUX1-209ENST00000487284 PIGOQ8TEQ8 1089 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 RUSC1Q9BVN2 902 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 SEMA6BQ9H3T3 888 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 MLXIPQ9HAP2 919 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 PTCH2Q9Y6C5 1203 aa15.72■□□□□ 0.11
CUX1-209ENST00000487284 KCNJ18B7U540 433 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 ZNF500O60304 480 aaPredicted RBP15.71■□□□□ 0.11
CUX1-209ENST00000487284 HMGCRP04035 888 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 EEF1GP26641 437 aaKnown RBP15.71■□□□□ 0.11
CUX1-209ENST00000487284 CACNB2Q08289 660 aaPredicted RBP15.71■□□□□ 0.11
CUX1-209ENST00000487284 KCNJ12Q14500 433 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 KRT31Q15323 416 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 DUSP28Q4G0W2 176 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 IQSEC1Q6DN90 963 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 RINT1Q6NUQ1 792 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 SMAP1Q8IYB5 467 aaPredicted RBP15.71■□□□□ 0.11
CUX1-209ENST00000487284 MYOCDQ8IZQ8 938 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 BANK1Q8NDB2 785 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 PXYLP1Q8TE99 480 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 CACTINQ8WUQ7 758 aaKnown RBP15.71■□□□□ 0.11
CUX1-209ENST00000487284 LENG1Q96BZ8 264 aaPredicted RBP15.71■□□□□ 0.11
CUX1-209ENST00000487284 ZSWIM4Q9H7M6 989 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 KCND2Q9NZV8 630 aa15.71■□□□□ 0.11
CUX1-209ENST00000487284 GH1P01241 217 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 HSPA1AP0DMV8 641 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 HSPA1BP0DMV9 641 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 QARSP47897 775 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 CACNB1Q02641 598 aaPredicted RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 TNFAIP2Q03169 654 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 LRRC63Q05C16 580 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 HSDL1Q3SXM5 330 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 HERC4Q5GLZ8 1057 aaPredicted RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 ABHD15Q6UXT9 468 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 C1orf186Q6ZWK4 172 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 CSGALNACT2Q8N6G5 542 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 GLIS3Q8NEA6 775 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 ANKRD20A12PQ8NF67 263 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 RTN4Q9NQC3 1192 aaKnown RBP15.7■□□□□ 0.1
CUX1-209ENST00000487284 PCDHA10Q9Y5I2 948 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 GSTTP1A0A1W2PQM5 241 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 ZBTB39O15060 712 aa15.7■□□□□ 0.1
CUX1-209ENST00000487284 GAP43P17677 238 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms