RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 KCNA5P22460 613 aa27.81■■■□□ 2.04
LIME1-206ENST00000487026 NFX1Q12986 1120 aaKnown RBP27.81■■■□□ 2.04
LIME1-206ENST00000487026 SMAP1Q8IYB5 467 aaPredicted RBP27.81■■■□□ 2.04
LIME1-206ENST00000487026 CRIPAKQ8N1N5 446 aa27.81■■■□□ 2.04
LIME1-206ENST00000487026 SH3GLB2Q9NR46 395 aa27.81■■■□□ 2.04
LIME1-206ENST00000487026 NOC2LQ9Y3T9 749 aaKnown RBP27.81■■■□□ 2.04
LIME1-206ENST00000487026 SAMM50Q9Y512 469 aa27.81■■■□□ 2.04
LIME1-206ENST00000487026 COL1A2P08123 1366 aa27.81■■■□□ 2.04
LIME1-206ENST00000487026 MSH4O15457 936 aa27.8■■■□□ 2.04
LIME1-206ENST00000487026 TCEAL5Q5H9L2 206 aa27.8■■■□□ 2.04
LIME1-206ENST00000487026 TRIM22Q8IYM9 498 aa27.8■■■□□ 2.04
LIME1-206ENST00000487026 TMEM40Q8WWA1 233 aa27.8■■■□□ 2.04
LIME1-206ENST00000487026 BBXQ8WY36 941 aaPredicted RBP27.8■■■□□ 2.04
LIME1-206ENST00000487026 GJA10Q969M2 543 aa27.8■■■□□ 2.04
LIME1-206ENST00000487026 ZNF274Q96GC6 653 aaPredicted RBP27.8■■■□□ 2.04
LIME1-206ENST00000487026 TM6SF1Q9BZW5 370 aa27.8■■■□□ 2.04
LIME1-206ENST00000487026 C5orf67F2Z3F1 127 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 CPLX1O14810 134 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 GRM6O15303 877 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 C22orf31O95567 290 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 TIGD5Q53EQ6 642 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 METTL13Q8N6R0 699 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 CLP1Q92989 425 aaKnown RBP27.79■■■□□ 2.04
LIME1-206ENST00000487026 MYO7AQ13402 2215 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 EVPLQ92817 2033 aa27.79■■■□□ 2.04
LIME1-206ENST00000487026 RPS6KA5O75582 802 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 CSPG5O95196 566 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 RB1P06400 928 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 NEFLP07196 543 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 GATMP50440 423 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 USP11P51784 963 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 KIZQ2M2Z5 673 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 PAN2Q504Q3 1202 aaKnown RBP27.78■■■□□ 2.04
LIME1-206ENST00000487026 NPAS4Q8IUM7 802 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 TBCKQ8TEA7 893 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 AIFM3Q96NN9 605 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 PDRG1Q9NUG6 133 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 PCDHA4Q9UN74 947 aa27.78■■■□□ 2.04
LIME1-206ENST00000487026 MRPL42Q9Y6G3 142 aaKnown RBP27.78■■■□□ 2.04
LIME1-206ENST00000487026 RALGAPA2Q2PPJ7 1873 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 MGEA5O60502 916 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 VTNP04004 478 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 EP400NLQ6ZTU2 488 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.77■■■□□ 2.04
LIME1-206ENST00000487026 C11orf84Q9BUA3 381 aaPredicted RBP27.77■■■□□ 2.04
LIME1-206ENST00000487026 ERVK-5Q9HDB9 667 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 DISC1Q9NRI5 854 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 ST3GAL5Q9UNP4 418 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 RWDD3Q9Y3V2 267 aa27.77■■■□□ 2.04
LIME1-206ENST00000487026 WDR64B1ANS9 1081 aa27.76■■■□□ 2.03
LIME1-206ENST00000487026 CHMP2AO43633 222 aa27.76■■■□□ 2.03
LIME1-206ENST00000487026 DEXIO95424 95 aa27.76■■■□□ 2.03
LIME1-206ENST00000487026 STAG3L1P0CL83 205 aa27.76■■■□□ 2.03
LIME1-206ENST00000487026 LEXMQ3ZCV2 418 aa27.76■■■□□ 2.03
LIME1-206ENST00000487026 NSUN3Q9H649 340 aaKnown RBP27.76■■■□□ 2.03
LIME1-206ENST00000487026 ALG13Q9NP73 1137 aaKnown RBP27.76■■■□□ 2.03
LIME1-206ENST00000487026 LRFN2Q9ULH4 789 aa27.76■■■□□ 2.03
LIME1-206ENST00000487026 MYH9P35579 1960 aaKnown RBP27.76■■■□□ 2.03
LIME1-206ENST00000487026 H3BQ06 376 aaPredicted RBP27.75■■■□□ 2.03
LIME1-206ENST00000487026 ZNF862O60290 1169 aa27.75■■■□□ 2.03
LIME1-206ENST00000487026 DTNBO60941 627 aa27.75■■■□□ 2.03
LIME1-206ENST00000487026 BLIDQ8IZY5 108 aa27.75■■■□□ 2.03
LIME1-206ENST00000487026 SLC5A5Q92911 643 aa27.75■■■□□ 2.03
LIME1-206ENST00000487026 OSMRQ99650 979 aa27.75■■■□□ 2.03
LIME1-206ENST00000487026 UNC45AQ9H3U1 944 aa27.75■■■□□ 2.03
LIME1-206ENST00000487026 GAS7O60861 476 aa27.74■■■□□ 2.03
LIME1-206ENST00000487026 CLCN3P51790 818 aa27.74■■■□□ 2.03
LIME1-206ENST00000487026 UGCGQ16739 394 aa27.74■■■□□ 2.03
LIME1-206ENST00000487026 LRCH2Q5VUJ6 765 aa27.74■■■□□ 2.03
LIME1-206ENST00000487026 CMTR2Q8IYT2 770 aaKnown RBP27.74■■■□□ 2.03
LIME1-206ENST00000487026 RIT2Q99578 217 aa27.74■■■□□ 2.03
LIME1-206ENST00000487026 ADAM2Q99965 735 aa27.74■■■□□ 2.03
LIME1-206ENST00000487026 DENND3A2RUS2 1198 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 GPR32O75388 356 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 TDP2O95551 362 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 SARSP49591 514 aaKnown RBP27.73■■■□□ 2.03
LIME1-206ENST00000487026 CRYBB1P53674 252 aaPredicted RBP27.73■■■□□ 2.03
LIME1-206ENST00000487026 NPY5RQ15761 445 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 EFCAB12Q6NXP0 572 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 LRRC71Q8N4P6 559 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 TEKT3Q9BXF9 490 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 CD320Q9NPF0 282 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 NRBP2Q9NSY0 501 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 PLAGL2Q9UPG8 496 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 CEP131Q9UPN4 1083 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 PCDHB7Q9Y5E2 793 aa27.73■■■□□ 2.03
LIME1-206ENST00000487026 M0R2N6 131 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 GPR182O15218 404 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 OATP04181 439 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 IL9P15248 144 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 PRKCEQ02156 737 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 Q4G0T1 1027 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 PTCRAQ6ISU1 281 aaPredicted RBP27.72■■■□□ 2.03
LIME1-206ENST00000487026 CPLX2Q6PUV4 134 aaKnown RBP27.72■■■□□ 2.03
LIME1-206ENST00000487026 FAM228AQ86W67 206 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 NEK9Q8TD19 979 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 PABPC5Q96DU9 382 aaKnown RBP27.72■■■□□ 2.03
LIME1-206ENST00000487026 ZNF668Q96K58 619 aaPredicted RBP27.72■■■□□ 2.03
LIME1-206ENST00000487026 FAM167AQ96KS9 214 aa27.72■■■□□ 2.03
LIME1-206ENST00000487026 PLVAPQ9BX97 442 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms