RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ZBTB5O15062 677 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 GNPATO15228 680 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 CALUO43852 315 aaPredicted RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 TTLL1O95922 423 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 IL1R1P14778 569 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 STAT3P40763 770 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 MAGOHP61326 146 aaKnown RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 POU5F1Q01860 360 aaKnown RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 GABPAQ06546 454 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 DHX9Q08211 1270 aaKnown RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 PWP2Q15269 919 aaKnown RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 DAAM2Q86T65 1068 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 SLF2Q8IX21 1173 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 MAGOHBQ96A72 148 aaKnown RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 CCDC114Q96M63 670 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 JPH2Q9BR39 696 aaPredicted RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 CD248Q9HCU0 757 aa13.3□□□□□ -0.28
COL3A1-206ENST00000487010 TTC7AQ9ULT0 858 aaPredicted RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 UTP11Q9Y3A2 253 aaKnown RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 AHDC1Q5TGY3 1603 aaPredicted RBP13.3□□□□□ -0.28
COL3A1-206ENST00000487010 GOLGA6L7A0A1B0GV03 622 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L10C9JJH3 530 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 PDXKO00764 312 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 AKAP3O75969 853 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 POTEIP0CG38 1075 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 SLC16A2P36021 539 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 GPSM2P81274 684 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 BYSLQ13895 437 aaKnown RBP13.29□□□□□ -0.28
COL3A1-206ENST00000487010 KCTD19Q17RG1 926 aaPredicted RBP13.29□□□□□ -0.28
COL3A1-206ENST00000487010 KRT71Q3SY84 523 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 DCAF17Q5H9S7 520 aaPredicted RBP13.29□□□□□ -0.28
COL3A1-206ENST00000487010 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 CACNA2D3Q8IZS8 1091 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 ZKSCAN4Q969J2 545 aaPredicted RBP13.29□□□□□ -0.28
COL3A1-206ENST00000487010 CELF4Q9BZC1 486 aaKnown RBP13.29□□□□□ -0.28
COL3A1-206ENST00000487010 METTL14Q9HCE5 456 aaKnown RBP13.29□□□□□ -0.28
COL3A1-206ENST00000487010 AMFRQ9UKV5 643 aa13.29□□□□□ -0.28
COL3A1-206ENST00000487010 CYP3A7-CYP3A51PA0A087WV96 503 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 DNM1LO00429 736 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 PPFIA2O75334 1257 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 CYP3A7P24462 503 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
COL3A1-206ENST00000487010 ANKRD20A8PQ5CZ79 823 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 SPDYCQ5MJ68 293 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 U2AF1L4Q8WU68 220 aaKnown RBP13.28□□□□□ -0.28
COL3A1-206ENST00000487010 TATDN2Q93075 761 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 MBOAT7Q96N66 472 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 PSMD1Q99460 953 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 MXD3Q9BW11 206 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 TXLNGYQ9BZA5 131 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 DPH5Q9H2P9 285 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 SLC16A3O15427 465 aaKnown RBP13.28□□□□□ -0.28
COL3A1-206ENST00000487010 FERP16591 822 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 CDR1P51861 262 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 GALCP54803 685 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 EIF3BP55884 814 aaKnown RBP13.28□□□□□ -0.28
COL3A1-206ENST00000487010 PSMC6P62333 389 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 SPRED3Q2MJR0 410 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 MFSD14BQ5SR56 506 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 GPATCH4Q5T3I0 446 aaKnown RBP13.28□□□□□ -0.28
COL3A1-206ENST00000487010 TCERG1LQ5VWI1 586 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 GJB7Q6PEY0 223 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 RPAINQ86UA6 219 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 SLFN12Q8IYM2 578 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 SYT2Q8N9I0 419 aaPredicted RBP13.28□□□□□ -0.28
COL3A1-206ENST00000487010 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 SLC35C1Q96A29 364 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 TLCD1Q96CP7 247 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 REEP2Q9BRK0 252 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 CNOT10Q9H9A5 744 aaKnown RBP13.28□□□□□ -0.28
COL3A1-206ENST00000487010 LRRC4CQ9HCJ2 640 aa13.28□□□□□ -0.28
COL3A1-206ENST00000487010 GTPBP10A4D1E9 387 aaKnown RBP13.27□□□□□ -0.28
COL3A1-206ENST00000487010 GFPT2O94808 682 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 UFL1O94874 794 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 FGGP02679 453 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 NR3C1P04150 777 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 RPL13P26373 211 aaKnown RBP13.27□□□□□ -0.28
COL3A1-206ENST00000487010 RFC4P35249 363 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 CASP4P49662 377 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 PTF1AQ7RTS3 328 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 SLC30A5Q8TAD4 765 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 RAB17Q9H0T7 212 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.28
COL3A1-206ENST00000487010 CXorf56Q9H5V9 222 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms