RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 JAM2P57087 298 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 EMBQ6PCB8 327 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 GBP6Q6ZN66 633 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 TPH2Q8IWU9 490 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 DYDC2Q96IM9 177 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 NAGPAQ9UK23 515 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
PTCD2-204ENST00000486995 YDJCA8MPS7 323 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 APBA3O96018 575 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 GAP43P17677 238 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
PTCD2-204ENST00000486995 SLC15A2Q16348 729 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 DNAAF5Q86Y56 855 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 TSEN2Q8NCE0 465 aaKnown RBP13.49□□□□□ -0.25
PTCD2-204ENST00000486995 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 NENFQ9UMX5 172 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 COL2A1P02458 1487 aaPredicted RBP13.49□□□□□ -0.25
PTCD2-204ENST00000486995 ZMYM2Q9UBW7 1377 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 TULP2O00295 520 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 EIF3DO15371 548 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTCD2-204ENST00000486995 PPP2R5CQ13362 524 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
PTCD2-204ENST00000486995 LRCH2Q5VUJ6 765 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 ALKBH5Q6P6C2 394 aaKnown RBP13.49□□□□□ -0.25
PTCD2-204ENST00000486995 LRRC31Q6UY01 552 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 SLC5A5Q92911 643 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 HERC5Q9UII4 1024 aaKnown RBP13.49□□□□□ -0.25
PTCD2-204ENST00000486995 TMX2Q9Y320 296 aa13.49□□□□□ -0.25
PTCD2-204ENST00000486995 CHMP2AO43633 222 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 FAM13AO94988 1023 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 GJB7Q6PEY0 223 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 FIZ1Q96SL8 496 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 SH3GL2Q99962 352 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
PTCD2-204ENST00000486995 GCNT4Q9P109 453 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 GTPBP10A4D1E9 387 aaKnown RBP13.48□□□□□ -0.25
PTCD2-204ENST00000486995 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 GCOM1H8Y6P7 765 aaPredicted RBP13.48□□□□□ -0.25
PTCD2-204ENST00000486995 POLR2MP0CAP2 368 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 CARSP49589 748 aaKnown RBP13.48□□□□□ -0.25
PTCD2-204ENST00000486995 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
PTCD2-204ENST00000486995 UBXN2AP68543 259 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 CCDC174Q6PII3 467 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 FOXR1Q6PIV2 292 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 TEX2Q8IWB9 1127 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 IFT20Q8IY31 132 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 LRRC57Q8N9N7 239 aa13.48□□□□□ -0.25
PTCD2-204ENST00000486995 WRAP73Q9P2S5 460 aaPredicted RBP13.48□□□□□ -0.25
PTCD2-204ENST00000486995 ZSCAN5CA6NGD5 496 aaPredicted RBP13.47□□□□□ -0.25
PTCD2-204ENST00000486995 HEXIM1O94992 359 aaKnown RBP13.47□□□□□ -0.25
PTCD2-204ENST00000486995 TRAF1Q13077 416 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 NFIL3Q16649 462 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 KSR1Q8IVT5 923 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 CNKSR1Q969H4 720 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
PTCD2-204ENST00000486995 KRT12Q99456 494 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 RANBP17Q9H2T7 1088 aaKnown RBP13.47□□□□□ -0.25
PTCD2-204ENST00000486995 GOLPH3Q9H4A6 298 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 PARVGQ9HBI0 331 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 EPB41L5Q9HCM4 733 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 TMEM59LQ9UK28 342 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 CES2O00748 559 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 FLOT1O75955 427 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 IVLP07476 585 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 ANXA13P27216 316 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 PSMC2P35998 433 aaKnown RBP13.47□□□□□ -0.25
PTCD2-204ENST00000486995 PRELPP51888 382 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 GUCY2DQ02846 1103 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 COG2Q14746 738 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 ZNF720Q7Z2F6 126 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 FAM186BQ8IYM0 893 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 PLEKHA4Q9H4M7 779 aa13.47□□□□□ -0.25
PTCD2-204ENST00000486995 ESYT3A0FGR9 886 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 SHTN1A0MZ66 631 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 GOLGA6CA6NDK9 693 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 DDX3XO00571 662 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTCD2-204ENST00000486995 KIF4AO95239 1232 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.25
PTCD2-204ENST00000486995 GOLGA6DP0CG33 693 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 ZBTB48P10074 688 aaPredicted RBP13.46□□□□□ -0.25
PTCD2-204ENST00000486995 ZNF131P52739 623 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 NNTQ13423 1086 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 CEP55Q53EZ4 464 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 ALS2CLQ60I27 953 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 FAM76AQ8TAV0 307 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 TRERF1Q96PN7 1200 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 GOLGA6AQ9NYA3 693 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 NFU1Q9UMS0 254 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
PTCD2-204ENST00000486995 KCNK3O14649 394 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms