RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 KRT86O43790 486 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 ABL1P00519 1130 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 EPB41P11171 864 aaKnown RBP22.39■■□□□ 1.17
HPS3-206ENST00000486530 NMT1P30419 496 aaKnown RBP22.39■■□□□ 1.17
HPS3-206ENST00000486530 EPHX2P34913 555 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 QARSP47897 775 aaKnown RBP22.39■■□□□ 1.17
HPS3-206ENST00000486530 KCNH2Q12809 1159 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 BAATQ14032 418 aaPredicted RBP22.39■■□□□ 1.17
HPS3-206ENST00000486530 VGLL4Q14135 290 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 CATSPERGQ6ZRH7 1159 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 EHBP1Q8NDI1 1231 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 SYN2Q92777 582 aaPredicted RBP22.39■■□□□ 1.17
HPS3-206ENST00000486530 FIZ1Q96SL8 496 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 NAPGQ99747 312 aaPredicted RBP22.39■■□□□ 1.17
HPS3-206ENST00000486530 POLD4Q9HCU8 107 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 MYPNQ86TC9 1320 aa22.39■■□□□ 1.17
HPS3-206ENST00000486530 PTPRFP10586 1907 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 KIAA1217Q5T5P2 1943 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 PAPPA2Q9BXP8 1791 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 WDR81Q562E7 1941 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 CCND2P30279 289 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 JAK3P52333 1124 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 SPA17Q15506 151 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 ERCC6LQ2NKX8 1250 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 CCDC122Q5T0U0 273 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 ZNF720Q7Z2F6 126 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 ZC3H15Q8WU90 426 aaKnown RBP22.38■■□□□ 1.17
HPS3-206ENST00000486530 UBXN4Q92575 508 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 JAKMIP2Q96AA8 810 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 MAF1Q9H063 256 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 ARHGAP20Q9P2F6 1191 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 TCEAL9Q9UHQ7 104 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 GUCA1BQ9UMX6 200 aa22.38■■□□□ 1.17
HPS3-206ENST00000486530 GLTPD2A6NH11 291 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 TGFB1I1O43294 461 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 NOL4O94818 638 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 XRCC5P13010 732 aaKnown RBP22.37■■□□□ 1.17
HPS3-206ENST00000486530 SFNP31947 248 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 ODR4Q5SWX8 454 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 PADI6Q6TGC4 694 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 OTOFQ9HC10 1997 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 PPP1R12BO60237 982 aaPredicted RBP22.37■■□□□ 1.17
HPS3-206ENST00000486530 HIP1RO75146 1068 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 AKAP3O75969 853 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 AFPP02771 609 aaKnown RBP22.37■■□□□ 1.17
HPS3-206ENST00000486530 KRT76Q01546 638 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 KCNA1Q09470 495 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 SH3D19Q5HYK7 790 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 TEX13BQ9BXU2 312 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 TSGA10Q9BZW7 698 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 DEF6Q9H4E7 631 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 CDC23Q9UJX2 597 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 PCDHB13Q9Y5F0 798 aa22.37■■□□□ 1.17
HPS3-206ENST00000486530 ZC3H4Q9UPT8 1303 aaKnown RBP22.36■■□□□ 1.17
HPS3-206ENST00000486530 LCA5LO95447 670 aa22.36■■□□□ 1.17
HPS3-206ENST00000486530 VAV2P52735 878 aa22.36■■□□□ 1.17
HPS3-206ENST00000486530 MAPK7Q13164 816 aa22.36■■□□□ 1.17
HPS3-206ENST00000486530 TMEM132BQ14DG7 1078 aa22.36■■□□□ 1.17
HPS3-206ENST00000486530 VSIG10LQ86VR7 867 aa22.36■■□□□ 1.17
HPS3-206ENST00000486530 GPRASP2Q96D09 838 aa22.36■■□□□ 1.17
HPS3-206ENST00000486530 TRIM10Q9UDY6 481 aa22.36■■□□□ 1.17
HPS3-206ENST00000486530 SSU72P8A0A1W2PR75 194 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 TESPA1A2RU30 521 aaPredicted RBP22.35■■□□□ 1.17
HPS3-206ENST00000486530 WDR64B1ANS9 1081 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 PLEKP08567 350 aaPredicted RBP22.35■■□□□ 1.17
HPS3-206ENST00000486530 RARRES1P49788 294 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 KIF11P52732 1056 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
HPS3-206ENST00000486530 ZC2HC1CQ53FD0 456 aaPredicted RBP22.35■■□□□ 1.17
HPS3-206ENST00000486530 HS2ST1Q7LGA3 356 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 NLRX1Q86UT6 975 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 RDM1Q8NG50 284 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 RBM46Q8TBY0 533 aaKnown RBP22.35■■□□□ 1.17
HPS3-206ENST00000486530 CRACR2AQ9BSW2 395 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 MKNK1Q9BUB5 465 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 ACAD9Q9H845 621 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 HOXC10Q9NYD6 342 aa22.35■■□□□ 1.17
HPS3-206ENST00000486530 CLIC2O15247 247 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 MAFGO15525 162 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 NR3C2P08235 984 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 MAPTP10636 758 aaKnown RBP22.34■■□□□ 1.17
HPS3-206ENST00000486530 EIF4A3P38919 411 aaKnown RBP22.34■■□□□ 1.17
HPS3-206ENST00000486530 POLR2FP61218 127 aaKnown RBP22.34■■□□□ 1.17
HPS3-206ENST00000486530 ALCAMQ13740 583 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 SFMBT2Q5VUG0 894 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 C4orf19Q8IY42 314 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 GOLGA5Q8TBA6 731 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 NSUN6Q8TEA1 469 aaKnown RBP22.34■■□□□ 1.17
HPS3-206ENST00000486530 PURBQ96QR8 312 aaKnown RBP22.34■■□□□ 1.17
HPS3-206ENST00000486530 TIPINQ9BVW5 301 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 NLRC4Q9NPP4 1024 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 PLCB1Q9NQ66 1216 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 PSMC2P35998 433 aaKnown RBP22.34■■□□□ 1.17
HPS3-206ENST00000486530 PSMC5P62195 406 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 DAW1Q8N136 415 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 CDCA5Q96FF9 252 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 CCDC43Q96MW1 224 aaKnown RBP22.34■■□□□ 1.17
HPS3-206ENST00000486530 STRA6Q9BX79 667 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 GANQ9H2C0 597 aa22.34■■□□□ 1.17
HPS3-206ENST00000486530 LARSQ9P2J5 1176 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms