RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ARIH1Q9Y4X5 557 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 CDY2AQ9Y6F7 541 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 V9GY48 417 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 COL4A6Q14031 1691 aa10.65□□□□□ -0.7
TMEM39A-208ENST00000486159 NID2Q14112 1375 aa10.65□□□□□ -0.71
TMEM39A-208ENST00000486159 NRCAMQ92823 1304 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 KLF18A0A0U1RQI7 1052 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 MBLAC1A4D2B0 266 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 FAM86C2PA6NEL3 165 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 SPDYE3A6NKU9 549 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 EFCAB14O75071 495 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 PRPF40AO75400 957 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 CCNE2O96020 404 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 CALM1P0DP23 149 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 CALM2P0DP24 149 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 CALM3P0DP25 149 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 KCNA5P22460 613 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 CD52P31358 61 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 GATMP50440 423 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 NAPAP54920 295 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 STK3Q13188 491 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 GPM6BQ13491 265 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 PLCB4Q15147 1175 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 TCEAL5Q5H9L2 206 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 FBXO47Q5MNV8 452 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 XRRA1Q6P2D8 792 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 LMCD1Q9NZU5 365 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 TUBE1Q9UJT0 475 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 HCN4Q9Y3Q4 1203 aa10.64□□□□□ -0.71
TMEM39A-208ENST00000486159 NCOR1O75376 2440 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 CCDC196A0A1B0GTZ2 297 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 VPS37CA5D8V6 355 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 SMCO2A6NFE2 343 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 H3BNC9 293 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 H3BQV1 296 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 CPLX1O14810 134 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 GRM6O15303 877 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 GNAT1P11488 350 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 IBSPP21815 317 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 GTF2F1P35269 517 aaKnown RBP eCLIP10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 ACTR2P61160 394 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 KRT85P78386 507 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 RTN1Q16799 776 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 AAK1Q2M2I8 961 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 TMEM266Q2M3C6 531 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 IER5LQ5T953 404 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 JAKMIP3Q5VZ66 844 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 PPP1R16BQ96T49 567 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 ANO3Q9BYT9 981 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 SCAND2PQ9GZW5 306 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 CDHR5Q9HBB8 845 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 RC3H2Q9HBD1 1191 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 AGO4Q9HCK5 861 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 RIC8AQ9NPQ8 531 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 ERAP1Q9NZ08 941 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 SLC9A2Q9UBY0 812 aa10.63□□□□□ -0.71
TMEM39A-208ENST00000486159 GOLGA8AA7E2F4 631 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 GOLGA8BA8MQT2 603 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 FAM86B1E9PN63 330 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 ZBTB43O43298 467 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 EDIL3O43854 480 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 DTNBO60941 627 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 CAND2O75155 1236 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 FAM86B2P0C5J1 330 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 ATP4AP20648 1035 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 CLK2P49760 499 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 UBE2HP62256 183 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 DLX2Q07687 328 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 EP400NLQ6ZTU2 488 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 TRMT1LQ7Z2T5 733 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 GIMAP8Q8ND71 665 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 BANK1Q8NDB2 785 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 RASGRP4Q8TDF6 673 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 WASF1Q92558 559 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 MRPL38Q96DV4 380 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 LRFN3Q9BTN0 628 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 TMX1Q9H3N1 280 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 SMARCAD1Q9H4L7 1026 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 JPH1Q9HDC5 661 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 CFAP45Q9UL16 551 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 NAP1L2Q9ULW6 460 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 KIAA1671Q9BY89 1806 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 TCHHQ07283 1943 aa10.62□□□□□ -0.71
TMEM39A-208ENST00000486159 STK36Q9NRP7 1315 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 POTEB3A0JP26 581 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 FSD2A1L4K1 749 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 GOLGA6L3A6NEY3 463 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 LINC01565O15544 149 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 DHX15O43143 795 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 MGEA5O60502 916 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 LETM1O95202 739 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 CTDNEP1O95476 244 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 DNAJB1P25685 340 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 CTNNB1P35222 781 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 LTBRP36941 435 aa10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 METAP2P50579 478 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM39A-208ENST00000486159 ADCY7P51828 1080 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms