RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 LMBR1Q8WVP7 490 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 PABPC4Q13310 644 aaKnown RBP eCLIP24.55■■□□□ 1.52
CLN5-202ENST00000485938 BIRC3Q13489 604 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 QRICH1Q2TAL8 776 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 CRY2Q49AN0 593 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 SYT2Q8N9I0 419 aaPredicted RBP24.55■■□□□ 1.52
CLN5-202ENST00000485938 ETNPPLQ8TBG4 499 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 SLITRK6Q9H5Y7 841 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 SPATA31C1P0DKV0 1188 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 FLT3P36888 993 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 MOXD1Q6UVY6 613 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 TBC1D16Q8TBP0 767 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 MXD3Q9BW11 206 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 AMACRQ9UHK6 382 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 INTUQ9ULD6 942 aa24.55■■□□□ 1.52
CLN5-202ENST00000485938 MEIS1O00470 390 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 DDX3XO00571 662 aaKnown RBP eCLIP24.54■■□□□ 1.521e-8■■■□□ 16.6
CLN5-202ENST00000485938 C6orf89Q6UWU4 347 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 RUFY4Q6ZNE9 571 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 NT5DC3Q86UY8 548 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 VPS36Q86VN1 386 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 CERKQ8TCT0 537 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 CRYGNQ8WXF5 182 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 SEC14L1Q92503 715 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 SLC35C1Q96A29 364 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 YY1AP1Q9H869 796 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 PPANQ9NQ55 473 aaKnown RBP24.54■■□□□ 1.52
CLN5-202ENST00000485938 DNM3Q9UQ16 869 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 PCDHA1Q9Y5I3 950 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 GREB1LQ9C091 1923 aaPredicted RBP24.54■■□□□ 1.52
CLN5-202ENST00000485938 ASTN1O14525 1302 aa24.54■■□□□ 1.52
CLN5-202ENST00000485938 SLC16A3O15427 465 aaKnown RBP24.53■■□□□ 1.52
CLN5-202ENST00000485938 DAPK3O43293 454 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 NR3C1P04150 777 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 MTMR3Q13615 1198 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 BMT2Q1RMZ1 405 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 TRAPPC3LQ5T215 181 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 CYFIP2Q96F07 1278 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 METTL14Q9HCE5 456 aaKnown RBP24.53■■□□□ 1.52
CLN5-202ENST00000485938 TYW1Q9NV66 732 aaKnown RBP24.53■■□□□ 1.52
CLN5-202ENST00000485938 RPA1P27694 616 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 USP8P40818 1118 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 CASP4P49662 377 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 NPEPPSP55786 919 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 GTF2IP78347 998 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 TCERG1LQ5VWI1 586 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 HES6Q96HZ4 224 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 GCNT4Q9P109 453 aa24.53■■□□□ 1.52
CLN5-202ENST00000485938 AGBL2Q5U5Z8 902 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 GJB7Q6PEY0 223 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 TMC3Q7Z5M5 1100 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 DAAM2Q86T65 1068 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 SYCE1Q8N0S2 351 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 ERMNQ8TAM6 284 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 UBLCP1Q8WVY7 318 aaPredicted RBP24.52■■□□□ 1.52
CLN5-202ENST00000485938 H0YHG0 523 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 MPHOSPH10O00566 681 aaKnown RBP24.52■■□□□ 1.52
CLN5-202ENST00000485938 IFT88Q13099 833 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 PRR16Q569H4 304 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 RNF187Q5TA31 235 aaPredicted RBP24.52■■□□□ 1.52
CLN5-202ENST00000485938 OLIG1Q8TAK6 271 aa24.52■■□□□ 1.52
CLN5-202ENST00000485938 U2AF1L4Q8WU68 220 aaKnown RBP24.52■■□□□ 1.52
CLN5-202ENST00000485938 P2RX7Q99572 595 aaKnown RBP24.52■■□□□ 1.52
CLN5-202ENST00000485938 GMNCA6NCL1 334 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 MEIS2O14770 477 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 TTI1O43156 1089 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 RPL13P26373 211 aaKnown RBP24.51■■□□□ 1.51
CLN5-202ENST00000485938 ARHGAP4P98171 946 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 KCTD19Q17RG1 926 aaPredicted RBP24.51■■□□□ 1.51
CLN5-202ENST00000485938 C3orf20Q8ND61 904 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 CCDC26Q8TAB7 109 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 CABS1Q96KC9 395 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 TAF1LQ8IZX4 1826 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 RSPH10B2B2RC85 870 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 TRAPPC3O43617 180 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 RSPH10BP0C881 870 aa24.51■■□□□ 1.51
CLN5-202ENST00000485938 GTPBP10A4D1E9 387 aaKnown RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 TBX3O15119 743 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 FERP16591 822 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 ACTN3Q08043 901 aaPredicted RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 AP3B2Q13367 1082 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 SLC30A5Q8TAD4 765 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 LENG9Q96B70 501 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 RBM17Q96I25 401 aaKnown RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 VCPKMTQ9H867 229 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 F8W031 263 aaPredicted RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 MNAT1P51948 309 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 GALCP54803 685 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 PPP2R2AP63151 447 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 POU5F1Q01860 360 aaKnown RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 LNX1Q8TBB1 728 aaPredicted RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 CELF4Q9BZC1 486 aaKnown RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 BCAS3Q9H6U6 928 aa24.5■■□□□ 1.51
CLN5-202ENST00000485938 CNOT8Q9UFF9 292 aaKnown RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 TTC7AQ9ULT0 858 aaPredicted RBP24.5■■□□□ 1.51
CLN5-202ENST00000485938 C6orf229H3BNL8 230 aa24.49■■□□□ 1.51
CLN5-202ENST00000485938 GFPT2O94808 682 aa24.49■■□□□ 1.51
CLN5-202ENST00000485938 TMOD1P28289 359 aa24.49■■□□□ 1.51
CLN5-202ENST00000485938 Q4G0T1 1027 aa24.49■■□□□ 1.51
CLN5-202ENST00000485938 MEX3CQ5U5Q3 659 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms