RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TET1Q8NFU7 2136 aa8.04□□□□□ -1.12
SMC4-217ENST00000485867 MFSD14AQ96MC6 490 aa8.04□□□□□ -1.12
SMC4-217ENST00000485867 HOXC10Q9NYD6 342 aa8.04□□□□□ -1.12
SMC4-217ENST00000485867 SLC4A7Q9Y6M7 1214 aa8.04□□□□□ -1.12
SMC4-217ENST00000485867 NAV1Q8NEY1 1877 aa8.04□□□□□ -1.12
SMC4-217ENST00000485867 UMODL1Q5DID0 1318 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 TECTAO75443 2155 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 A0A1W2PP55 124 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 TLR3O15455 904 aaKnown RBP8.03□□□□□ -1.12
SMC4-217ENST00000485867 ICMTO60725 284 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 PGK2P07205 417 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 ASGR1P07306 291 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 CA3P07451 260 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 DRD2P14416 443 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 ATP2A2P16615 1042 aaKnown RBP8.03□□□□□ -1.12
SMC4-217ENST00000485867 GUCY1A2P33402 732 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 GSTM4Q03013 218 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 ABCB5Q2M3G0 1257 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 ZNF792Q3KQV3 632 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 NAA16Q6N069 864 aaPredicted RBP8.03□□□□□ -1.12
SMC4-217ENST00000485867 ADGRA1Q86SQ6 560 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 KRTAP19-1Q8IUB9 90 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 GALNT12Q8IXK2 581 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 TCF12Q99081 682 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 MMP19Q99542 508 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 TANGO6Q9C0B7 1094 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 HIPK3Q9H422 1215 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 CERS4Q9HA82 394 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 COPRSQ9NQ92 184 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 LRP2BPQ9P2M1 347 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 USTQ9Y2C2 406 aa8.03□□□□□ -1.12
SMC4-217ENST00000485867 DIS3Q9Y2L1 958 aaKnown RBP8.03□□□□□ -1.12
SMC4-217ENST00000485867 CACNA1BQ00975 2339 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 A0A096LPE4 126 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 A0A1W2PPZ6 126 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 DUSP11O75319 330 aaKnown RBP8.02□□□□□ -1.13
SMC4-217ENST00000485867 SLC25A27O95847 323 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 C6orf222P0C671 652 aaPredicted RBP8.02□□□□□ -1.13
SMC4-217ENST00000485867 MCAMP43121 646 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 IRAK1P51617 712 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 TMEM67Q5HYA8 995 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 FAM178BQ8IXR5 827 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 PCSK9Q8NBP7 692 aaKnown RBP8.02□□□□□ -1.13
SMC4-217ENST00000485867 C2CD4AQ8NCU7 369 aaPredicted RBP8.02□□□□□ -1.13
SMC4-217ENST00000485867 UPF3AQ9H1J1 476 aaKnown RBP8.02□□□□□ -1.13
SMC4-217ENST00000485867 WNT8AQ9H1J5 351 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 EHD4Q9H223 541 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 CLEC4MQ9H2X3 399 aaPredicted RBP8.02□□□□□ -1.13
SMC4-217ENST00000485867 SERPINB13Q9UIV8 391 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 FAM184BQ9ULE4 1060 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 CNPY2Q9Y2B0 182 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 TANC1Q9C0D5 1861 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 RIF1Q5UIP0 2472 aaKnown RBP8.02□□□□□ -1.13
SMC4-217ENST00000485867 PTPRCP08575 1304 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 FAM186AA6NE01 2351 aa8.02□□□□□ -1.13
SMC4-217ENST00000485867 CFAP54Q96N23 3096 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 SIP14410 1827 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 A0A1W2PRG0 241 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 ADCY6O43306 1168 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
SMC4-217ENST00000485867 LPXNO60711 386 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 FLOT1O75955 427 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 F13BP05160 661 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 UBTFL1P0CB47 393 aaPredicted RBP8.01□□□□□ -1.13
SMC4-217ENST00000485867 ALADP13716 330 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 GRIA4P48058 902 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 CCL23P55773 120 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 TAP1Q03518 808 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 PCDH1Q08174 1060 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 TFCP2Q12800 502 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 GRB10Q13322 594 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 TMEM132BQ14DG7 1078 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 SEPT2Q15019 361 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 ZNF423Q2M1K9 1284 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 SPRED3Q2MJR0 410 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 CERKLQ49MI3 558 aaPredicted RBP8.01□□□□□ -1.13
SMC4-217ENST00000485867 KIAA1755Q5JYT7 1200 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 ARNTL2Q8WYA1 636 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 ANKS1AQ92625 1134 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 NOC4LQ9BVI4 516 aaKnown RBP8.01□□□□□ -1.13
SMC4-217ENST00000485867 CABP5Q9NP86 173 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 AKAP2Q9Y2D5 859 aa8.01□□□□□ -1.13
SMC4-217ENST00000485867 FAM95CA0A1B0GW59 222 aa8□□□□□ -1.13
SMC4-217ENST00000485867 H3BRB1 525 aa8□□□□□ -1.13
SMC4-217ENST00000485867 CTAGE5O15320 804 aa8□□□□□ -1.13
SMC4-217ENST00000485867 DCXO43602 365 aa8□□□□□ -1.13
SMC4-217ENST00000485867 SNAI1O95863 264 aaPredicted RBP8□□□□□ -1.13
SMC4-217ENST00000485867 SHMT1P34896 483 aa8□□□□□ -1.13
SMC4-217ENST00000485867 SERPINB4P48594 390 aa8□□□□□ -1.13
SMC4-217ENST00000485867 GJA9P57773 515 aa8□□□□□ -1.13
SMC4-217ENST00000485867 DYNLL1P63167 89 aaKnown RBP8□□□□□ -1.13
SMC4-217ENST00000485867 SOX4Q06945 474 aaPredicted RBP8□□□□□ -1.13
SMC4-217ENST00000485867 TTLL4Q14679 1199 aa8□□□□□ -1.13
SMC4-217ENST00000485867 KCTD2Q14681 263 aa8□□□□□ -1.13
SMC4-217ENST00000485867 SPRED2Q7Z698 418 aa8□□□□□ -1.13
SMC4-217ENST00000485867 RIOX2Q8IUF8 465 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms