RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 EYA4O95677 639 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 MMP1P03956 469 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 ARP10275 920 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
HMGN1-215ENST00000485550 FGD1P98174 961 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 SIGLEC14Q08ET2 396 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 FUT2Q10981 343 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 PPFIA1Q13136 1202 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 BTG3Q14201 252 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-215ENST00000485550 DNAJB3Q8WWF6 145 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 CLP1Q92989 425 aaKnown RBP12.08□□□□□ -0.48
HMGN1-215ENST00000485550 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 EHMT1Q9H9B1 1298 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 RC3H2Q9HBD1 1191 aaKnown RBP12.08□□□□□ -0.48
HMGN1-215ENST00000485550 RIC8AQ9NPQ8 531 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 KCNH7Q9NS40 1196 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-215ENST00000485550 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
HMGN1-215ENST00000485550 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-215ENST00000485550 NRCAMQ92823 1304 aa12.08□□□□□ -0.48
HMGN1-215ENST00000485550 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 CHRNA1P02708 482 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 GHRP10912 638 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 DNAJB1P25685 340 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 AVPR2P30518 371 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 ADCY7P51828 1080 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 FOXK2Q01167 660 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 CBX2Q14781 532 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-215ENST00000485550 GRIK4Q16099 956 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 RBM23Q86U06 439 aaKnown RBP12.07□□□□□ -0.48
HMGN1-215ENST00000485550 SMRP1Q8NCR6 262 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 EVPLQ92817 2033 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 ASIC4Q96FT7 647 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 PCYT2Q99447 389 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 SMARCAD1Q9H4L7 1026 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 ERAP1Q9NZ08 941 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 SLC9A2Q9UBY0 812 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 PLAGL2Q9UPG8 496 aa12.07□□□□□ -0.48
HMGN1-215ENST00000485550 USP15Q9Y4E8 981 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-215ENST00000485550 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
HMGN1-215ENST00000485550 MAFGO15525 162 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 CAND2O75155 1236 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 GLP2RO95838 553 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 ITGB1P05556 798 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 INSRRP14616 1297 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 ZNF76P36508 570 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 NRIP1P48552 1158 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 KRT32Q14532 448 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 FAM26DQ5JW98 314 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 MARCH8Q5T0T0 291 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 JAKMIP3Q5VZ66 844 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 Q6ZUG5 572 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 ASCL5Q7RTU5 278 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 PPP2R3CQ969Q6 453 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 ZNF689Q96CS4 500 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-215ENST00000485550 JAKMIP1Q96N16 626 aaKnown RBP12.06□□□□□ -0.48
HMGN1-215ENST00000485550 ANO3Q9BYT9 981 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 FAM49AQ9H0Q0 323 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-215ENST00000485550 AZI2Q9H6S1 392 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 JPH1Q9HDC5 661 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-215ENST00000485550 TUBE1Q9UJT0 475 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 PCDHGC5Q9Y5F6 944 aa12.06□□□□□ -0.48
HMGN1-215ENST00000485550 ENPP3O14638 875 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 ADAMTS3O15072 1205 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 FOSP01100 380 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-215ENST00000485550 PDGFBP01127 241 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-215ENST00000485550 METAP2P50579 478 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGN1-215ENST00000485550 ACTR2P61160 394 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 TMEM62Q0P6H9 643 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 COASYQ13057 564 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 ITGB3BPQ13352 177 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-215ENST00000485550 CEP55Q53EZ4 464 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 TAF2Q6P1X5 1199 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 RSPH3Q86UC2 560 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 EFHBQ8N7U6 833 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 SPPL3Q8TCT6 385 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 TRAPPC12Q8WVT3 735 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 BRF1Q92994 677 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 PHF7Q9BWX1 381 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-215ENST00000485550 PLVAPQ9BX97 442 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 AGO4Q9HCK5 861 aaKnown RBP12.05□□□□□ -0.48
HMGN1-215ENST00000485550 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 SNX14Q9Y5W7 946 aa12.05□□□□□ -0.48
HMGN1-215ENST00000485550 MRPL42Q9Y6G3 142 aaKnown RBP12.05□□□□□ -0.48
HMGN1-215ENST00000485550 DCHS1Q96JQ0 3298 aa12.04□□□□□ -0.48
HMGN1-215ENST00000485550 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
HMGN1-215ENST00000485550 SP100P23497 879 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-215ENST00000485550 STAT5BP51692 787 aa12.04□□□□□ -0.48
HMGN1-215ENST00000485550 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
HMGN1-215ENST00000485550 MGAT3Q09327 533 aa12.04□□□□□ -0.48
HMGN1-215ENST00000485550 LPIN1Q14693 890 aa12.04□□□□□ -0.48
HMGN1-215ENST00000485550 PLCB4Q15147 1175 aa12.04□□□□□ -0.48
HMGN1-215ENST00000485550 PAN2Q504Q3 1202 aaKnown RBP12.04□□□□□ -0.48
HMGN1-215ENST00000485550 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
HMGN1-215ENST00000485550 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms